Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118271 |
| length | 681 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G105033 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1806903 ~ 1807667 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118282 | lncRNA | upstream | 840 | 1805696 ~ 1806063 (+) | True | G105041 |
| TU118280 | lncRNA | upstream | 6910 | 1799673 ~ 1799993 (+) | True | G105039 |
| TU118284 | lncRNA | upstream | 7579 | 1798498 ~ 1799324 (+) | True | G105043 |
| TU118374 | lncRNA | upstream | 35871 | 1766809 ~ 1771032 (+) | True | G105111 |
| TU118368 | lncRNA | upstream | 49706 | 1756381 ~ 1757197 (+) | True | G105107 |
| TU118380 | lncRNA | downstream | 2409 | 1810076 ~ 1810305 (+) | True | G105115 |
| TU118381 | lncRNA | downstream | 3914 | 1811581 ~ 1811808 (+) | True | G105116 |
| TU118422 | lncRNA | downstream | 26947 | 1834614 ~ 1835116 (+) | True | G105130 |
| TU118389 | lncRNA | downstream | 46350 | 1854017 ~ 1854230 (+) | True | G105122 |
| TU118386 | lncRNA | downstream | 46642 | 1854309 ~ 1854718 (+) | True | G105119 |
| XM_036935139.1 | mRNA | upstream | 11965 | 1745298 ~ 1794938 (+) | False | LOC110514512 |
| XM_036935148.1 | mRNA | upstream | 11965 | 1745298 ~ 1794938 (+) | True | LOC110514512 |
| XM_021594953.2 | mRNA | upstream | 99228 | 1704889 ~ 1707675 (+) | False | tmem42a |
| XR_005034588.1 | mRNA | upstream | 99228 | 1704889 ~ 1707675 (+) | True | tmem42a |
| XM_036935053.1 | mRNA | upstream | 108534 | 1683561 ~ 1698369 (+) | True | gpd1l |
| XM_036935153.1 | mRNA | downstream | 9141 | 1816808 ~ 1853570 (+) | True | slc6a3 |
| XM_036935163.1 | mRNA | downstream | 57698 | 1865365 ~ 1901448 (+) | False | LOC110511503 |
| XM_036935165.1 | mRNA | downstream | 57698 | 1865365 ~ 1901448 (+) | False | LOC110511503 |
| XM_036935173.1 | mRNA | downstream | 57698 | 1865365 ~ 1901448 (+) | False | LOC110511503 |
| XM_036935178.1 | mRNA | downstream | 57698 | 1865365 ~ 1901448 (+) | False | LOC110511503 |
| TU118283 | other | upstream | 96346 | 1708969 ~ 1710557 (+) | True | G105042 |
| TU118276 | other | upstream | 106472 | 1699073 ~ 1700431 (+) | True | G105036 |
| TU118057 | other | upstream | 454040 | 1309278 ~ 1352863 (+) | True | tgfbr2b |
| TU117843 | other | upstream | 653154 | 1153061 ~ 1153749 (+) | True | G104761 |
| TU116939 | other | upstream | 934388 | 860506 ~ 872515 (+) | True | cmc1 |
| TU119728 | other | downstream | 713049 | 2520716 ~ 2527972 (+) | True | G106019 |
| TU119854 | other | downstream | 910294 | 2717961 ~ 2718525 (+) | True | G106122 |
| TU120020 | other | downstream | 1167156 | 2974823 ~ 3039475 (+) | True | G106240 |
| TU120034 | other | downstream | 1399130 | 3206797 ~ 3391033 (+) | True | G106253 |
| TU120299 | other | downstream | 1559538 | 3367205 ~ 3425955 (+) | False | mboat1 |
