Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118919 |
| length | 665 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G105433 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1821475 ~ 1822139 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118918 | lncRNA | downstream | 1800 | 1819446 ~ 1819675 (-) | True | G105432 |
| TU118917 | lncRNA | downstream | 3130 | 1818125 ~ 1818345 (-) | True | G105431 |
| TU118868 | lncRNA | downstream | 4194 | 1816870 ~ 1817281 (-) | True | G105425 |
| TU118867 | lncRNA | downstream | 4351 | 1816870 ~ 1817124 (-) | False | G105425 |
| TU118862 | lncRNA | downstream | 8251 | 1812934 ~ 1813224 (-) | True | G105423 |
| TU118929 | lncRNA | upstream | 28479 | 1850618 ~ 1853497 (-) | True | G105442 |
| TU118931 | lncRNA | upstream | 37612 | 1859751 ~ 1859955 (-) | True | G105444 |
| TU118934 | lncRNA | upstream | 39091 | 1861230 ~ 1861847 (-) | True | G105446 |
| TU118939 | lncRNA | upstream | 42182 | 1864321 ~ 1864786 (-) | True | G105447 |
| TU118952 | lncRNA | upstream | 53940 | 1876079 ~ 1877187 (-) | True | G105455 |
| XM_036935117.1 | mRNA | downstream | 89142 | 1709516 ~ 1732333 (-) | False | zdhhc3a |
| XM_036935127.1 | mRNA | downstream | 89142 | 1709516 ~ 1732333 (-) | False | zdhhc3a |
| XM_036935130.1 | mRNA | downstream | 89142 | 1709516 ~ 1732333 (-) | False | zdhhc3a |
| XM_036935112.1 | mRNA | downstream | 89487 | 1709516 ~ 1731988 (-) | False | zdhhc3a |
| XM_036935133.1 | mRNA | downstream | 89487 | 1713954 ~ 1731988 (-) | True | zdhhc3a |
| XM_036935194.1 | mRNA | upstream | 98871 | 1921010 ~ 1925939 (-) | True | nrsn1 |
| XM_036935207.1 | mRNA | upstream | 480497 | 2302636 ~ 2303881 (-) | True | LOC118937333 |
| XR_005034602.1 | mRNA | upstream | 608136 | 2430275 ~ 2440302 (-) | False | LOC118937335 |
| XR_005034601.1 | mRNA | upstream | 609626 | 2431765 ~ 2440302 (-) | False | LOC118937335 |
| XM_021593876.2 | mRNA | upstream | 624235 | 2446374 ~ 2449761 (-) | True | sox4b |
| TU118763 | other | downstream | 179743 | 1641267 ~ 1641732 (-) | True | G105340 |
| TU118629 | other | downstream | 202439 | 1593781 ~ 1619036 (-) | False | LOC110515405 |
| TU118668 | other | downstream | 279769 | 1540730 ~ 1541706 (-) | True | G105285 |
| TU118550 | other | downstream | 479140 | 1333986 ~ 1342335 (-) | False | G105220 |
| TU118889 | other | upstream | 90453 | 1912592 ~ 1916995 (-) | False | G105427 |
| TU118905 | other | upstream | 90453 | 1912592 ~ 1916995 (-) | False | G105427 |
| TU118893 | other | upstream | 90533 | 1912672 ~ 1916995 (-) | False | G105427 |
| TU118896 | other | upstream | 90533 | 1912672 ~ 1916995 (-) | False | G105427 |
| TU118901 | other | upstream | 90533 | 1912672 ~ 1916995 (-) | False | G105427 |
