RNA id: TU119611


Basic Information

Item Value
RNA id TU119611
length 425
RNA type TUCP
GC content 0.34
exon number 3
gene id G105938
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2362999 ~ 2363531 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGTTGAACTATAGACTACATGGTACTATGTTGAACTATAGACTACATGGTACTATGATGAACTGTAGACTACAAGGTACTATGTTAAACTGTAGACTACATGGTACTATGTTGAACTGTAGACTACATGGTACTATGTTGAACTATAGACTACATGGTACTATGTTGAACTATAGACTACATGGTACTATGTTGAACTGTAGACTACATGGTACTATGTTGAACTATAGACTATATGGTACTATGTTGAACTGTAGACTACATGGTACTATATTGAACTATAGACTACATGGTACTATGTTGAACTATAGACTACATGGTACTATGTTGAACTATAGACTACATGGTACTATGTTGAACTGTAGACTACATGGTACTATGTTGAACTATAGACTACATGGTTCTATGTTGAACTATAGACTACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119606 lncRNA downstream 7774 2354977 ~ 2355225 (-) True G105936
TU119577 lncRNA downstream 49481 2311501 ~ 2313518 (-) True G105913
TU119575 lncRNA downstream 52840 2309637 ~ 2310159 (-) True G105911
TU119565 lncRNA downstream 72165 2290514 ~ 2290834 (-) True G105905
TU119555 lncRNA downstream 87686 2274680 ~ 2275313 (-) True G105895
TU119622 lncRNA upstream 11829 2375360 ~ 2376248 (-) True G105945
TU119632 lncRNA upstream 22064 2385595 ~ 2386717 (-) False G105951
TU119633 lncRNA upstream 22064 2385595 ~ 2385893 (-) True G105951
TU119644 lncRNA upstream 37919 2401450 ~ 2402497 (-) True G105955
TU119649 lncRNA upstream 42488 2406019 ~ 2406549 (-) True G105959
XM_036935207.1 mRNA downstream 59118 2302636 ~ 2303881 (-) True LOC118937333
XM_036935194.1 mRNA downstream 437060 1921010 ~ 1925939 (-) True nrsn1
XM_036935117.1 mRNA downstream 630666 1709516 ~ 1732333 (-) False zdhhc3a
XR_005034602.1 mRNA upstream 66744 2430275 ~ 2440302 (-) False LOC118937335
XR_005034601.1 mRNA upstream 68234 2431765 ~ 2440302 (-) False LOC118937335
XM_021593876.2 mRNA upstream 82843 2446374 ~ 2449761 (-) True sox4b
XM_036961511.1 mRNA upstream 150179 2513710 ~ 2516419 (-) True LOC110512766
XM_036961522.1 mRNA upstream 154656 2518187 ~ 2519022 (-) True LOC110514306
TU119210 other downstream 242498 2118079 ~ 2120501 (-) False G105636
TU119012 other downstream 401412 1958484 ~ 1961587 (-) True G105492
TU118914 other downstream 444972 1917351 ~ 1918027 (-) True G105428
TU118909 other downstream 446004 1912672 ~ 1916995 (-) False G105427
TU119710 other upstream 119410 2482941 ~ 2483356 (-) True G106001
TU119712 other upstream 120329 2483860 ~ 2485123 (-) True G106003
TU121654 other upstream 1389030 3752561 ~ 3776178 (-) False LOC110506994
TU121655 other upstream 1389030 3752561 ~ 3776178 (-) True LOC110506994
TU121876 other upstream 1627795 3991326 ~ 3992847 (-) True G107456

Expression Profile