Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU119545 |
| length | 928 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G105888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2465164 ~ 2466571 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU119543 | lncRNA | upstream | 466 | 2464444 ~ 2464698 (+) | True | G105887 |
| TU119537 | lncRNA | upstream | 5837 | 2459062 ~ 2459327 (+) | True | G105883 |
| TU119536 | lncRNA | upstream | 6246 | 2458602 ~ 2458918 (+) | True | G105882 |
| TU119534 | lncRNA | upstream | 8970 | 2455762 ~ 2456194 (+) | True | G105880 |
| TU119531 | lncRNA | upstream | 11787 | 2453160 ~ 2453377 (+) | True | G105878 |
| TU119546 | lncRNA | downstream | 534 | 2466823 ~ 2468498 (+) | True | G105889 |
| TU119711 | lncRNA | downstream | 18508 | 2484797 ~ 2485146 (+) | True | G106002 |
| TU119713 | lncRNA | downstream | 18908 | 2485197 ~ 2485617 (+) | True | G106004 |
| TU119715 | lncRNA | downstream | 19939 | 2486228 ~ 2486430 (+) | True | G106006 |
| TU119724 | lncRNA | downstream | 48635 | 2514924 ~ 2536882 (+) | True | G106015 |
| XM_036961507.1 | mRNA | upstream | 44543 | 2418186 ~ 2420621 (+) | True | LOC118944030 |
| XM_036961504.1 | mRNA | upstream | 287168 | 2166121 ~ 2177996 (+) | True | LOC118944029 |
| XM_036935200.1 | mRNA | upstream | 344709 | 2116553 ~ 2120455 (+) | True | LOC110516539 |
| XM_036935178.1 | mRNA | upstream | 563716 | 1865365 ~ 1901448 (+) | False | LOC110511503 |
| XR_005034608.1 | mRNA | downstream | 511947 | 2978236 ~ 2978524 (+) | True | LOC118937340 |
| XR_005034604.1 | mRNA | downstream | 512497 | 2978786 ~ 2980193 (+) | False | LOC118937337 |
| XR_005034605.1 | mRNA | downstream | 512524 | 2978813 ~ 2980193 (+) | False | LOC118937337 |
| XR_005034606.1 | mRNA | downstream | 512540 | 2978829 ~ 2980193 (+) | False | LOC118937337 |
| XR_005034607.1 | mRNA | downstream | 513614 | 2979903 ~ 2980193 (+) | True | LOC118937337 |
| TU118283 | other | upstream | 754607 | 1708969 ~ 1710557 (+) | True | G105042 |
| TU118276 | other | upstream | 764733 | 1699073 ~ 1700431 (+) | True | G105036 |
| TU118057 | other | upstream | 1112301 | 1309278 ~ 1352863 (+) | True | tgfbr2b |
| TU117843 | other | upstream | 1311415 | 1153061 ~ 1153749 (+) | True | G104761 |
| TU116939 | other | upstream | 1592649 | 860506 ~ 872515 (+) | True | cmc1 |
| TU119728 | other | downstream | 54427 | 2520716 ~ 2527972 (+) | True | G106019 |
| TU119854 | other | downstream | 251672 | 2717961 ~ 2718525 (+) | True | G106122 |
| TU120020 | other | downstream | 508534 | 2974823 ~ 3039475 (+) | True | G106240 |
| TU120034 | other | downstream | 740508 | 3206797 ~ 3391033 (+) | True | G106253 |
| TU120299 | other | downstream | 900916 | 3367205 ~ 3425955 (+) | False | mboat1 |
