Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU121499 |
| length | 231 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G107218 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 3326814 ~ 3327150 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121464 | lncRNA | downstream | 59371 | 3266099 ~ 3267443 (-) | True | G107196 |
| TU121450 | lncRNA | downstream | 81046 | 3245343 ~ 3245768 (-) | True | G107184 |
| TU121409 | lncRNA | downstream | 146112 | 3180031 ~ 3180702 (-) | True | G107153 |
| TU121403 | lncRNA | downstream | 158985 | 3167387 ~ 3167829 (-) | True | G107148 |
| TU121383 | lncRNA | downstream | 196611 | 3129591 ~ 3130203 (-) | True | G107132 |
| TU121512 | lncRNA | upstream | 28734 | 3355884 ~ 3357022 (-) | True | G107228 |
| TU121514 | lncRNA | upstream | 32558 | 3359708 ~ 3363142 (-) | True | G107230 |
| TU121515 | lncRNA | upstream | 35642 | 3362792 ~ 3364741 (-) | True | G107231 |
| TU121516 | lncRNA | upstream | 36746 | 3363896 ~ 3365464 (-) | True | G107232 |
| TU121502 | lncRNA | upstream | 39995 | 3367145 ~ 3425978 (-) | False | G107219 |
| XM_036961533.1 | mRNA | downstream | 790652 | 2533802 ~ 2536162 (-) | True | LOC110511524 |
| XM_036961522.1 | mRNA | downstream | 807792 | 2518187 ~ 2519022 (-) | True | LOC110514306 |
| XM_036961511.1 | mRNA | downstream | 810395 | 2513710 ~ 2516419 (-) | True | LOC110512766 |
| XM_021593876.2 | mRNA | downstream | 877053 | 2446374 ~ 2449761 (-) | True | sox4b |
| XR_005034601.1 | mRNA | downstream | 886512 | 2431765 ~ 2440302 (-) | False | LOC118937335 |
| XM_036935254.1 | mRNA | upstream | 65496 | 3392646 ~ 3405112 (-) | False | LOC118937342 |
| XM_036961539.1 | mRNA | upstream | 113936 | 3441086 ~ 3443541 (-) | True | LOC118944031 |
| XM_036935266.1 | mRNA | upstream | 120007 | 3447157 ~ 3520769 (-) | True | LOC110514058 |
| XM_036935302.1 | mRNA | upstream | 200220 | 3527370 ~ 3663400 (-) | False | LOC110512975 |
| XM_036935282.1 | mRNA | upstream | 200220 | 3527370 ~ 3663402 (-) | False | LOC110512975 |
| TU119712 | other | downstream | 841691 | 2483860 ~ 2485123 (-) | True | G106003 |
| TU119710 | other | downstream | 843458 | 2482941 ~ 2483356 (-) | True | G106001 |
| TU119611 | other | downstream | 963283 | 2362999 ~ 2363531 (-) | True | G105938 |
| TU119210 | other | downstream | 1206313 | 2118079 ~ 2120501 (-) | False | G105636 |
| TU119012 | other | downstream | 1365227 | 1958484 ~ 1961587 (-) | True | G105492 |
| TU121654 | other | upstream | 425411 | 3752561 ~ 3776178 (-) | False | LOC110506994 |
| TU121655 | other | upstream | 425411 | 3752561 ~ 3776178 (-) | True | LOC110506994 |
| TU121876 | other | upstream | 664176 | 3991326 ~ 3992847 (-) | True | G107456 |
| TU122066 | other | upstream | 968275 | 4295425 ~ 4296815 (-) | True | G107574 |
| TU122094 | other | upstream | 970295 | 4297445 ~ 4300230 (-) | False | G107576 |
