Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122660 |
| length | 836 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G107942 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4784631 ~ 4785544 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122648 | lncRNA | upstream | 20159 | 4763291 ~ 4764472 (+) | True | G107932 |
| TU122623 | lncRNA | upstream | 47377 | 4735246 ~ 4737254 (+) | True | LOC118937361 |
| TU122620 | lncRNA | upstream | 50783 | 4731957 ~ 4733848 (+) | True | G107917 |
| TU122611 | lncRNA | upstream | 62341 | 4711544 ~ 4722290 (+) | True | G107912 |
| TU122607 | lncRNA | upstream | 73692 | 4710089 ~ 4710939 (+) | True | G107911 |
| TU122677 | lncRNA | downstream | 34189 | 4819733 ~ 4820296 (+) | True | G107958 |
| TU122686 | lncRNA | downstream | 51839 | 4837383 ~ 4837938 (+) | True | G107965 |
| TU122688 | lncRNA | downstream | 53860 | 4839404 ~ 4840100 (+) | True | G107967 |
| TU122775 | lncRNA | downstream | 56528 | 4842072 ~ 4842349 (+) | True | G108031 |
| TU122786 | lncRNA | downstream | 64203 | 4849747 ~ 4849961 (+) | True | G108042 |
| XR_005034656.1 | mRNA | upstream | 47347 | 4735657 ~ 4737284 (+) | False | LOC118937361 |
| XR_005034650.1 | mRNA | upstream | 47348 | 4735657 ~ 4737283 (+) | False | LOC118937361 |
| XR_005034653.1 | mRNA | upstream | 47349 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034654.1 | mRNA | upstream | 47349 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034655.1 | mRNA | upstream | 47350 | 4735657 ~ 4737281 (+) | False | LOC118937361 |
| XR_005034658.1 | mRNA | downstream | 362557 | 5148101 ~ 5176987 (+) | False | LOC110506140 |
| XM_036935645.1 | mRNA | downstream | 362562 | 5148106 ~ 5176987 (+) | True | LOC110506140 |
| XM_036935664.1 | mRNA | downstream | 410387 | 5195931 ~ 5227041 (+) | False | tbc1d31 |
| XM_036935658.1 | mRNA | downstream | 410395 | 5195939 ~ 5227041 (+) | True | tbc1d31 |
| XM_036935668.1 | mRNA | downstream | 442513 | 5228057 ~ 5235894 (+) | True | LOC110520809 |
| TU122634 | other | upstream | 39045 | 4744168 ~ 4745586 (+) | True | G107922 |
| TU120937 | other | upstream | 646135 | 4137813 ~ 4138496 (+) | False | G106814 |
| TU120940 | other | upstream | 646135 | 4137813 ~ 4138496 (+) | True | G106814 |
| TU120871 | other | upstream | 757037 | 4027075 ~ 4027594 (+) | True | G106775 |
| TU120618 | other | upstream | 1106781 | 3676265 ~ 3677850 (+) | False | G106595 |
| TU122673 | other | downstream | 23195 | 4808739 ~ 4811575 (+) | True | G107955 |
| TU122792 | other | downstream | 72367 | 4857911 ~ 4858274 (+) | True | G108048 |
| TU123045 | other | downstream | 350812 | 5136356 ~ 5136992 (+) | True | G108280 |
| TU123151 | other | downstream | 510635 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123438 | other | downstream | 721002 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
