Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122677 |
| length | 374 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G107958 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4819733 ~ 4820296 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122660 | lncRNA | upstream | 34189 | 4784631 ~ 4785544 (+) | True | G107942 |
| TU122648 | lncRNA | upstream | 55261 | 4763291 ~ 4764472 (+) | True | G107932 |
| TU122623 | lncRNA | upstream | 82479 | 4735246 ~ 4737254 (+) | True | LOC118937361 |
| TU122620 | lncRNA | upstream | 85885 | 4731957 ~ 4733848 (+) | True | G107917 |
| TU122611 | lncRNA | upstream | 97443 | 4711544 ~ 4722290 (+) | True | G107912 |
| TU122686 | lncRNA | downstream | 17087 | 4837383 ~ 4837938 (+) | True | G107965 |
| TU122688 | lncRNA | downstream | 19108 | 4839404 ~ 4840100 (+) | True | G107967 |
| TU122775 | lncRNA | downstream | 21776 | 4842072 ~ 4842349 (+) | True | G108031 |
| TU122786 | lncRNA | downstream | 29451 | 4849747 ~ 4849961 (+) | True | G108042 |
| TU122816 | lncRNA | downstream | 67572 | 4887868 ~ 4888093 (+) | True | G108070 |
| XR_005034656.1 | mRNA | upstream | 82449 | 4735657 ~ 4737284 (+) | False | LOC118937361 |
| XR_005034650.1 | mRNA | upstream | 82450 | 4735657 ~ 4737283 (+) | False | LOC118937361 |
| XR_005034653.1 | mRNA | upstream | 82451 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034654.1 | mRNA | upstream | 82451 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034655.1 | mRNA | upstream | 82452 | 4735657 ~ 4737281 (+) | False | LOC118937361 |
| XR_005034658.1 | mRNA | downstream | 327805 | 5148101 ~ 5176987 (+) | False | LOC110506140 |
| XM_036935645.1 | mRNA | downstream | 327810 | 5148106 ~ 5176987 (+) | True | LOC110506140 |
| XM_036935664.1 | mRNA | downstream | 375635 | 5195931 ~ 5227041 (+) | False | tbc1d31 |
| XM_036935658.1 | mRNA | downstream | 375643 | 5195939 ~ 5227041 (+) | True | tbc1d31 |
| XM_036935668.1 | mRNA | downstream | 407761 | 5228057 ~ 5235894 (+) | True | LOC110520809 |
| TU122673 | other | upstream | 8158 | 4808739 ~ 4811575 (+) | True | G107955 |
| TU122634 | other | upstream | 74147 | 4744168 ~ 4745586 (+) | True | G107922 |
| TU120937 | other | upstream | 681237 | 4137813 ~ 4138496 (+) | False | G106814 |
| TU120940 | other | upstream | 681237 | 4137813 ~ 4138496 (+) | True | G106814 |
| TU120871 | other | upstream | 792139 | 4027075 ~ 4027594 (+) | True | G106775 |
| TU122792 | other | downstream | 37615 | 4857911 ~ 4858274 (+) | True | G108048 |
| TU123045 | other | downstream | 316060 | 5136356 ~ 5136992 (+) | True | G108280 |
| TU123151 | other | downstream | 475883 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123438 | other | downstream | 686250 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123443 | other | downstream | 760997 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
