Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122952 |
| length | 288 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G108192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5005270 ~ 5005557 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122950 | lncRNA | upstream | 449 | 5004577 ~ 5004821 (+) | True | G108190 |
| TU122949 | lncRNA | upstream | 1154 | 5003856 ~ 5004116 (+) | True | G108189 |
| TU122927 | lncRNA | upstream | 20295 | 4984767 ~ 4984975 (+) | True | G108170 |
| TU122901 | lncRNA | upstream | 41165 | 4963870 ~ 4964105 (+) | True | G108149 |
| TU122891 | lncRNA | upstream | 49488 | 4955448 ~ 4955782 (+) | True | G108139 |
| TU122953 | lncRNA | downstream | 1649 | 5007206 ~ 5007598 (+) | True | G108193 |
| TU122958 | lncRNA | downstream | 5376 | 5010933 ~ 5011660 (+) | True | G108198 |
| TU122974 | lncRNA | downstream | 19151 | 5024708 ~ 5024950 (+) | True | G108214 |
| TU122977 | lncRNA | downstream | 21623 | 5027180 ~ 5027412 (+) | True | G108217 |
| TU122981 | lncRNA | downstream | 30467 | 5036024 ~ 5036266 (+) | True | G108221 |
| XR_005034656.1 | mRNA | upstream | 267986 | 4735657 ~ 4737284 (+) | False | LOC118937361 |
| XR_005034650.1 | mRNA | upstream | 267987 | 4735657 ~ 4737283 (+) | False | LOC118937361 |
| XR_005034653.1 | mRNA | upstream | 267988 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034654.1 | mRNA | upstream | 267988 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XR_005034655.1 | mRNA | upstream | 267989 | 4735657 ~ 4737281 (+) | False | LOC118937361 |
| XR_005034658.1 | mRNA | downstream | 142544 | 5148101 ~ 5176987 (+) | False | LOC110506140 |
| XM_036935645.1 | mRNA | downstream | 142549 | 5148106 ~ 5176987 (+) | True | LOC110506140 |
| XM_036935664.1 | mRNA | downstream | 190374 | 5195931 ~ 5227041 (+) | False | tbc1d31 |
| XM_036935658.1 | mRNA | downstream | 190382 | 5195939 ~ 5227041 (+) | True | tbc1d31 |
| XM_036935668.1 | mRNA | downstream | 222500 | 5228057 ~ 5235894 (+) | True | LOC110520809 |
| TU122792 | other | upstream | 146996 | 4857911 ~ 4858274 (+) | True | G108048 |
| TU122673 | other | upstream | 193695 | 4808739 ~ 4811575 (+) | True | G107955 |
| TU122634 | other | upstream | 259684 | 4744168 ~ 4745586 (+) | True | G107922 |
| TU120937 | other | upstream | 866774 | 4137813 ~ 4138496 (+) | False | G106814 |
| TU123045 | other | downstream | 130799 | 5136356 ~ 5136992 (+) | True | G108280 |
| TU123151 | other | downstream | 290622 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123438 | other | downstream | 500989 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123443 | other | downstream | 575736 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123575 | other | downstream | 714408 | 5719965 ~ 5725579 (+) | False | G108682 |
