Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123129 |
| length | 1073 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G108336 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5240611 ~ 5241683 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123127 | lncRNA | upstream | 261 | 5238227 ~ 5240350 (+) | True | G108334 |
| TU123118 | lncRNA | upstream | 14481 | 5225206 ~ 5226130 (+) | True | G108332 |
| TU123115 | lncRNA | upstream | 16355 | 5223607 ~ 5224256 (+) | False | G108331 |
| TU123117 | lncRNA | upstream | 16355 | 5223607 ~ 5224256 (+) | True | G108331 |
| TU123116 | lncRNA | upstream | 16526 | 5223607 ~ 5224085 (+) | False | G108331 |
| TU123125 | lncRNA | downstream | 8030 | 5249713 ~ 5254032 (+) | True | G108333 |
| TU123089 | lncRNA | downstream | 41945 | 5283628 ~ 5285729 (+) | False | LOC118937366 |
| TU123088 | lncRNA | downstream | 43324 | 5285007 ~ 5285729 (+) | True | LOC118937366 |
| TU123162 | lncRNA | downstream | 92070 | 5333753 ~ 5334485 (+) | True | G108361 |
| TU123363 | lncRNA | downstream | 124148 | 5365831 ~ 5366530 (+) | True | G108529 |
| XM_036935668.1 | mRNA | upstream | 4717 | 5228057 ~ 5235894 (+) | True | LOC110520809 |
| XM_036935664.1 | mRNA | upstream | 13570 | 5195931 ~ 5227041 (+) | False | tbc1d31 |
| XM_036935658.1 | mRNA | upstream | 13570 | 5195939 ~ 5227041 (+) | True | tbc1d31 |
| XR_005034658.1 | mRNA | upstream | 63624 | 5148101 ~ 5176987 (+) | False | LOC110506140 |
| XM_021587149.2 | mRNA | downstream | 32473 | 5274156 ~ 5275584 (+) | True | mrpl32 |
| XR_005034673.1 | mRNA | downstream | 42011 | 5283694 ~ 5285741 (+) | False | LOC118937366 |
| XM_021595380.2 | mRNA | downstream | 64593 | 5306276 ~ 5310035 (+) | True | ccdc127a |
| XM_036935725.1 | mRNA | downstream | 79871 | 5321554 ~ 5349672 (+) | False | phf20l1 |
| XM_036935729.1 | mRNA | downstream | 79871 | 5321554 ~ 5349672 (+) | False | phf20l1 |
| TU123045 | other | upstream | 103619 | 5136356 ~ 5136992 (+) | True | G108280 |
| TU122792 | other | upstream | 382337 | 4857911 ~ 4858274 (+) | True | G108048 |
| TU122673 | other | upstream | 429036 | 4808739 ~ 4811575 (+) | True | G107955 |
| TU122634 | other | upstream | 495025 | 4744168 ~ 4745586 (+) | True | G107922 |
| TU120940 | other | upstream | 1102115 | 4137813 ~ 4138496 (+) | True | G106814 |
| TU123151 | other | downstream | 54496 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123438 | other | downstream | 264863 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123443 | other | downstream | 339610 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123575 | other | downstream | 478282 | 5719965 ~ 5725579 (+) | False | G108682 |
| TU123579 | other | downstream | 478282 | 5719965 ~ 5725382 (+) | True | G108682 |
