Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123519 |
| length | 929 |
| lncRNA type | antisense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G108643 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5757004 ~ 5757953 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123568 | lncRNA | upstream | 45094 | 5711149 ~ 5711910 (+) | True | G108677 |
| TU123567 | lncRNA | upstream | 46558 | 5709357 ~ 5710446 (+) | True | G108676 |
| TU123566 | lncRNA | upstream | 47954 | 5707717 ~ 5709050 (+) | True | G108675 |
| TU123546 | lncRNA | upstream | 93145 | 5661042 ~ 5663859 (+) | True | G108663 |
| TU123534 | lncRNA | upstream | 110979 | 5644628 ~ 5646025 (+) | True | G108653 |
| TU123520 | lncRNA | downstream | 649 | 5758602 ~ 5760920 (+) | True | G108644 |
| TU123593 | lncRNA | downstream | 9993 | 5767946 ~ 5769067 (+) | True | G108694 |
| TU123605 | lncRNA | downstream | 16427 | 5774380 ~ 5774708 (+) | True | G108697 |
| TU123607 | lncRNA | downstream | 17954 | 5775907 ~ 5779231 (+) | True | G108698 |
| TU123610 | lncRNA | downstream | 18917 | 5776870 ~ 5778747 (+) | True | G108699 |
| XM_036935962.1 | mRNA | upstream | 3157 | 5616004 ~ 5753847 (+) | False | jarid2a |
| XM_036935963.1 | mRNA | upstream | 3157 | 5616004 ~ 5753847 (+) | True | jarid2a |
| XR_005034689.1 | mRNA | upstream | 8908 | 5615996 ~ 5748096 (+) | False | jarid2a |
| XM_036935845.1 | mRNA | upstream | 164751 | 5575379 ~ 5592253 (+) | False | LOC110506279 |
| XM_036935846.1 | mRNA | upstream | 164751 | 5575381 ~ 5592253 (+) | False | LOC110506279 |
| XM_036935966.1 | mRNA | downstream | 54294 | 5812247 ~ 5839646 (+) | True | mylipb |
| XM_036936009.1 | mRNA | downstream | 83564 | 5841517 ~ 5854174 (+) | False | LOC110505528 |
| XM_036936052.1 | mRNA | downstream | 196028 | 5953981 ~ 5955445 (+) | False | LOC110505637 |
| XR_005034712.1 | mRNA | downstream | 218247 | 5976200 ~ 6002265 (+) | False | LOC110505679 |
| XR_005034714.1 | mRNA | downstream | 220313 | 5978266 ~ 5979890 (+) | True | LOC118937375 |
| TU123575 | other | upstream | 31425 | 5719965 ~ 5725579 (+) | False | G108682 |
| TU123579 | other | upstream | 31622 | 5719965 ~ 5725382 (+) | True | G108682 |
| TU123443 | other | upstream | 174554 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123438 | other | upstream | 214139 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123151 | other | upstream | 457071 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123616 | other | downstream | 22261 | 5780214 ~ 5782644 (+) | True | G108702 |
| TU123653 | other | downstream | 142558 | 5900511 ~ 5900950 (+) | True | G108733 |
| TU123496 | other | downstream | 195933 | 5953886 ~ 5958769 (+) | False | LOC110505637 |
| TU123500 | other | downstream | 195933 | 5953886 ~ 5958813 (+) | False | LOC110505637 |
| TU123491 | other | downstream | 195992 | 5953945 ~ 5958769 (+) | False | LOC110505637 |
