RNA id: TU126159



Basic Information


Item Value
RNA id TU126159
length 314
RNA type TUCP
GC content 0.47
exon number 2
gene id G110674
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8073366 ~ 8103920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCACAGCCCTACATACAACCAATGTAGCTAATCGGATGCACCATAAACCTGGGGATAGGACAGGTATAAagtgtagactacagtgtgtaatcATGTCCATGCTAATTGCTAACCTCCAGGTGTCCGCTGAAGGCTGCATGGTGCAGCGCCGTGCGCCCGGCCCGGTCCGACACGTTCACATTGCTGAGGAGAGGGACCAGGGCCTCGGCACAGCGGACCGCCTTATTGGCCGCAGCGATGTGGAGCGGCGTTTGCCAGTTCTTGTCCCTGGCGTTCACATCGGCAGAGTGTTTCAATAGCACCTGGACTGCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126144 lncRNA upstream 92217 7912531 ~ 7981149 (+) True G110660
TU126127 lncRNA upstream 169178 7879860 ~ 7904188 (+) True G110646
TU126121 lncRNA upstream 201080 7871758 ~ 7872286 (+) True G110642
TU125839 lncRNA upstream 221779 7849144 ~ 7851587 (+) True G110409
TU125835 lncRNA upstream 233833 7838484 ~ 7839533 (+) True G110405
TU126188 lncRNA downstream 25841 8129761 ~ 8132133 (+) True G110702
TU126258 lncRNA downstream 170071 8273991 ~ 8274437 (+) True G110751
TU126206 lncRNA downstream 180390 8284310 ~ 8329229 (+) True G110717
TU126449 lncRNA downstream 235991 8339911 ~ 8340121 (+) True G110900
TU126453 lncRNA downstream 240268 8344188 ~ 8344471 (+) True G110904
XM_036934583.1 mRNA upstream 20336 8050410 ~ 8053030 (+) True LOC118936929
XM_036937027.1 mRNA upstream 32795 8033190 ~ 8040571 (+) True LOC110516794
XM_036937020.1 mRNA upstream 45103 8025970 ~ 8028263 (+) True LOC118937633
XM_036937008.1 mRNA upstream 52795 8018278 ~ 8020571 (+) True LOC118937632
XM_036937004.1 mRNA upstream 59224 8006831 ~ 8014142 (+) True LOC118937631
XM_036937064.1 mRNA downstream 28519 8132439 ~ 8159035 (+) False LOC118936503
XM_036937074.1 mRNA downstream 28520 8132440 ~ 8159035 (+) False LOC118936503
XM_036937082.1 mRNA downstream 28520 8132440 ~ 8159035 (+) False LOC118936503
XM_036937069.1 mRNA downstream 35042 8138962 ~ 8159036 (+) True LOC118936503
XM_036937123.1 mRNA downstream 101180 8205100 ~ 8327730 (+) False LOC110514591
TU126124 other upstream 138229 7898596 ~ 7935137 (+) True G110644
TU125754 other upstream 366877 7701982 ~ 7706489 (+) True creb5b
TU125753 other upstream 377124 7615959 ~ 7696242 (+) False creb5b
TU125259 other upstream 768721 7303028 ~ 7304645 (+) True pde11al
TU125129 other upstream 932387 7135247 ~ 7140979 (+) False G109821
TU126891 other downstream 932884 9036804 ~ 9037901 (+) False LOC110518388
TU127103 other downstream 1117565 9221485 ~ 9229025 (+) True LOC110535224
TU127136 other downstream 1226349 9330269 ~ 9331616 (+) False G111453
TU127140 other downstream 1226349 9330269 ~ 9331616 (+) False G111453
TU127143 other downstream 1226349 9330269 ~ 9331616 (+) False G111453

Expression Profile