RNA id: TU126517



Basic Information


Item Value
RNA id TU126517
length 349
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G110962
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8396762 ~ 8397110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGAATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGAATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGAATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCAGGATCATTCTCATCCATGATCATTCTCATCCATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126487 lncRNA downstream 19727 8376644 ~ 8377035 (-) True G110935
TU126477 lncRNA downstream 35452 8360900 ~ 8361310 (-) True G110928
TU126459 lncRNA downstream 48717 8347539 ~ 8348045 (-) True G110910
TU126406 lncRNA downstream 67915 8326499 ~ 8328847 (-) False G110873
TU126593 lncRNA upstream 23820 8420930 ~ 8421684 (-) True G111017
TU126631 lncRNA upstream 102994 8500104 ~ 8505604 (-) False G111047
TU126641 lncRNA upstream 126213 8523323 ~ 8523546 (-) True G111055
TU126724 lncRNA upstream 204811 8601921 ~ 8602255 (-) True G111111
TU126750 lncRNA upstream 205215 8602325 ~ 8639765 (-) True G111135
XM_021586325.2 mRNA downstream 1286 8393785 ~ 8395476 (-) False LOC100136714
XM_021586317.2 mRNA downstream 1495 8393785 ~ 8395267 (-) False LOC100136714
NM_001124677.1 mRNA downstream 1535 8394736 ~ 8395227 (-) True LOC100136714
XM_036937047.1 mRNA downstream 272603 8088064 ~ 8124159 (-) False LOC110516569
XM_036937043.1 mRNA downstream 273080 8088064 ~ 8123682 (-) False LOC110516569
XM_036937149.1 mRNA upstream 27178 8424288 ~ 8429320 (-) False LOC118937639
XM_036937096.1 mRNA upstream 68997 8466107 ~ 8471212 (-) False LOC118936301
XM_021586355.2 mRNA upstream 68997 8466107 ~ 8471521 (-) False LOC118936301
XM_021586345.2 mRNA upstream 68997 8466107 ~ 8471522 (-) True LOC118936301
XM_036937129.1 mRNA upstream 110469 8507579 ~ 8510893 (-) False LOC110506629
TU126444 other downstream 71082 8324960 ~ 8325680 (-) False G110896
TU126445 other downstream 71082 8324960 ~ 8325680 (-) True G110896
TU126328 other downstream 273093 8104064 ~ 8123669 (-) False LOC110516569
TU126324 other downstream 273206 8097895 ~ 8123556 (-) False LOC110516569
TU126590 other upstream 26701 8423811 ~ 8426012 (-) True LOC118937639
TU126633 other upstream 105098 8502208 ~ 8505604 (-) True G111047
TU126623 other upstream 124892 8522002 ~ 8522709 (-) False G111044
TU126626 other upstream 124892 8522002 ~ 8522761 (-) True G111044
TU127197 other upstream 308194 8705304 ~ 8736398 (-) True LOC110535184

Expression Profile