RNA id: TU126641



Basic Information


Item Value
RNA id TU126641
length 224
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G111055
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8523323 ~ 8523546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TCCATCCTGCCCTGATGACAGAGATGGACAGTGGCTGTAGTTAGAGTCCATCCTGCCCTGATGACAGAGATGGACAGTGGATGTAGTTAGGGACCATCCTGCCCTGATGACAGAGATGGACAGTGGATGTAGTTAGAGTCCATCCTGCCCTGATGACAGAGATGGACAGTGGATGTAGTTAGAGTCCATCCTGCCCTGATGACAGAGATGGACAGTGGCTGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126631 lncRNA downstream 17719 8500104 ~ 8505604 (-) False G111047
TU126593 lncRNA downstream 101639 8420930 ~ 8421684 (-) True G111017
TU126517 lncRNA downstream 126213 8396762 ~ 8397110 (-) True G110962
TU126487 lncRNA downstream 146288 8376644 ~ 8377035 (-) True G110935
TU126477 lncRNA downstream 162013 8360900 ~ 8361310 (-) True G110928
TU126724 lncRNA upstream 78375 8601921 ~ 8602255 (-) True G111111
TU126750 lncRNA upstream 78779 8602325 ~ 8639765 (-) True G111135
TU126759 lncRNA upstream 89417 8612963 ~ 8624946 (-) True G111143
TU126761 lncRNA upstream 90634 8614180 ~ 8615636 (-) True G111144
TU126773 lncRNA upstream 116260 8639806 ~ 8640140 (-) True G111156
XM_036937134.1 mRNA downstream 9962 8507579 ~ 8513361 (-) True LOC110506629
XM_036937138.1 mRNA downstream 12403 8507579 ~ 8510920 (-) False LOC110506629
XM_036937129.1 mRNA downstream 12430 8507579 ~ 8510893 (-) False LOC110506629
XM_021586345.2 mRNA downstream 51801 8466107 ~ 8471522 (-) True LOC118936301
XM_021586355.2 mRNA downstream 51802 8466107 ~ 8471521 (-) False LOC118936301
XM_036937168.1 mRNA upstream 169590 8693136 ~ 8736940 (-) False LOC110535184
XM_036937174.1 mRNA upstream 169590 8693136 ~ 8752164 (-) False LOC110535184
XM_036937178.1 mRNA upstream 246335 8769881 ~ 8782987 (-) False LOC110519098
XM_036937181.1 mRNA upstream 268090 8791636 ~ 8802003 (-) True LOC110516599
XM_036937187.1 mRNA upstream 280656 8804202 ~ 8819077 (-) False LOC110514444
TU126626 other downstream 562 8522002 ~ 8522761 (-) True G111044
TU126623 other downstream 614 8522002 ~ 8522709 (-) False G111044
TU126633 other downstream 17719 8502208 ~ 8505604 (-) True G111047
TU126590 other downstream 97311 8423811 ~ 8426012 (-) True LOC118937639
TU126444 other downstream 197643 8324960 ~ 8325680 (-) False G110896
TU127197 other upstream 181758 8705304 ~ 8736398 (-) True LOC110535184
TU127230 other upstream 247990 8771536 ~ 8772820 (-) True LOC110519098
TU127371 other upstream 526743 9050289 ~ 9050798 (-) True G111650
TU127380 other upstream 544066 9067612 ~ 9068062 (-) True G111659
TU127651 other upstream 915816 9439362 ~ 9439938 (-) True G111855

Expression Profile