RNA id: TU126865



Basic Information


Item Value
RNA id TU126865
length 666
lncRNA type antisense_over
GC content 0.46
exon number 3
gene id G111241
representative False

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8796283 ~ 8798144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATAAATACTTTTGTTTGATGATAGTAATGTAAACTACTCACATCTGGGGTGAAGAGGAACTTCACTCCATTCAAGGAGCCTTTCAAGGTCAAGCCTCTGATCAGAAAGATGGTCAGCACCACATAAGGTAATGTTGAGGTGATATACACAGCCTAATGGGAGGAGATCACAGGGTAATGTTGAGGTAATATACACAGCCTAATGGGAGGAGATCACAGGGTAATGTTGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGATGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGGGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGATGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGTGAAATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGGGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGTGATATACACAGCCTAATGGGAGGAGACCACAGGGTAATGTTGAGGTGATATACACAGCCTAATGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126841 lncRNA upstream 34933 8761131 ~ 8761350 (+) True G111220
TU126839 lncRNA upstream 36287 8759704 ~ 8759996 (+) True G111218
TU126836 lncRNA upstream 42170 8753808 ~ 8754113 (+) True G111215
TU126835 lncRNA upstream 44147 8751670 ~ 8752136 (+) True G111214
TU126833 lncRNA upstream 51213 8741481 ~ 8745070 (+) True G111212
TU126927 lncRNA downstream 101542 8899686 ~ 8899958 (+) True G111290
TU126928 lncRNA downstream 102610 8900754 ~ 8900955 (+) True G111291
TU126930 lncRNA downstream 105519 8903663 ~ 8903938 (+) True G111293
TU126947 lncRNA downstream 145899 8944043 ~ 8944369 (+) True G111310
TU126952 lncRNA downstream 154911 8953055 ~ 8953304 (+) True G111315
XR_005034903.1 mRNA upstream 150322 8627771 ~ 8645961 (+) True LOC118937640
XM_036937049.1 mRNA upstream 290680 8480516 ~ 8505603 (+) False LOC118936502
XM_036937193.1 mRNA downstream 22215 8820359 ~ 9072449 (+) False LOC110518388
XM_036937201.1 mRNA downstream 22216 8820360 ~ 9072449 (+) False LOC110518388
XM_036937197.1 mRNA downstream 22217 8820361 ~ 9072449 (+) False LOC110518388
XM_036937203.1 mRNA downstream 22217 8820361 ~ 9072449 (+) False LOC110518388
XM_036937205.1 mRNA downstream 216749 9014893 ~ 9072449 (+) False LOC110518388
TU126159 other upstream 692363 8073366 ~ 8103920 (+) True G110674
TU126124 other upstream 861146 7898596 ~ 7935137 (+) True G110644
TU125754 other upstream 1089794 7701982 ~ 7706489 (+) True creb5b
TU125753 other upstream 1100041 7615959 ~ 7696242 (+) False creb5b
TU125259 other upstream 1491638 7303028 ~ 7304645 (+) True pde11al
TU126891 other downstream 238660 9036804 ~ 9037901 (+) False LOC110518388
TU127103 other downstream 423341 9221485 ~ 9229025 (+) True LOC110535224
TU127136 other downstream 532125 9330269 ~ 9331616 (+) False G111453
TU127140 other downstream 532125 9330269 ~ 9331616 (+) False G111453
TU127143 other downstream 532125 9330269 ~ 9331616 (+) False G111453

Expression Profile