RNA id: TU128803


Basic Information

Item Value
RNA id TU128803
length 202
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G112793
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10833585 ~ 10833786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GATAGATGGAAGCTGTCAGTGGTACCACTATGGGATCAGCTTGGATAGATAGATGGAAGCTGTCAGTGGTACCACTATGGGATCAgcttggatagatagatagatggttgTTGACAGTGGTACCACTATGGGATCAGCTTGGATAGATAGATGGTTGTTGGCAGTGGTACCACTATGGGATCAGCTTGGATAGATAGATGGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128801 lncRNA upstream 2922 10830464 ~ 10830663 (+) True G112791
TU128796 lncRNA upstream 6510 10826478 ~ 10827075 (+) True G112788
TU128665 lncRNA upstream 20992 10811518 ~ 10812593 (+) True G112697
TU128791 lncRNA upstream 22794 10810487 ~ 10810791 (+) True G112784
TU128708 lncRNA upstream 30294 10802690 ~ 10803291 (+) True G112724
TU128804 lncRNA downstream 3874 10837660 ~ 10839399 (+) True G112794
TU128806 lncRNA downstream 6413 10840199 ~ 10841233 (+) True G112796
TU128807 lncRNA downstream 12947 10846733 ~ 10847395 (+) True G112797
TU128828 lncRNA downstream 32608 10866394 ~ 10872761 (+) True G112814
TU128834 lncRNA downstream 33233 10867019 ~ 10872179 (+) True G112815
XM_036937626.1 mRNA upstream 123225 10668176 ~ 10710360 (+) False LOC110507508
XM_036937888.1 mRNA downstream 198206 11031992 ~ 11074284 (+) False washc5
XM_036937880.1 mRNA downstream 198209 11031995 ~ 11083098 (+) True washc5
XM_036937915.1 mRNA downstream 250575 11084361 ~ 11096664 (+) False nsmce2
XM_036937906.1 mRNA downstream 250589 11084375 ~ 11096664 (+) False nsmce2
XM_036937901.1 mRNA downstream 250589 11084375 ~ 11097464 (+) False nsmce2
TU128663 other upstream 7522 10811518 ~ 10826063 (+) False G112697
TU127846 other upstream 1057134 9774203 ~ 9776451 (+) True LOC118937659
TU127811 other upstream 1109714 9702040 ~ 9723871 (+) False LOC110506952
TU127568 other upstream 1389544 9440309 ~ 9444041 (+) False G111788
TU129356 other downstream 406946 11240732 ~ 11243069 (+) False fbxo32
TU129360 other downstream 427768 11261554 ~ 11273000 (+) False elovl4a
TU129361 other downstream 427768 11261554 ~ 11272897 (+) True elovl4a
TU129492 other downstream 581145 11414931 ~ 11415178 (+) True G113285
TU129561 other downstream 644190 11477976 ~ 11482741 (+) True G113313

Expression Profile