RNA id: TU129314



Basic Information


Item Value
RNA id TU129314
length 206
lncRNA type antisense_over
GC content 0.40
exon number 1
gene id G113158
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11096964 ~ 11097169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aggatttttaaatgtttttatttaactaggcaagtcagttaagaacaaattattatttacaatgacggtctaccggggaacagtgggttaactgccttgttcaggggcagaaagacagatttttcttaccttgtcagctcagggattcgatctagcaacctttcggttactggcccaatgctctaatcactaggctacctgccccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU129289 lncRNA downstream 14209 11072829 ~ 11082755 (-) True G113138
TU129290 lncRNA downstream 24489 11066565 ~ 11072475 (-) False G113138
TU129287 lncRNA downstream 29978 11063603 ~ 11066986 (-) False G113138
TU129309 lncRNA downstream 33505 11062108 ~ 11063459 (-) True G113153
TU129306 lncRNA downstream 36915 11058263 ~ 11060049 (-) False LOC118937688
TU129323 lncRNA upstream 9413 11106582 ~ 11106982 (-) True G113167
TU129327 lncRNA upstream 14353 11111522 ~ 11111843 (-) True G113171
TU129328 lncRNA upstream 14690 11111859 ~ 11112168 (-) True G113172
TU129329 lncRNA upstream 15663 11112832 ~ 11113072 (-) True G113173
TU129331 lncRNA upstream 17452 11114621 ~ 11114924 (-) True G113175
XR_005035048.1 mRNA downstream 37491 11058984 ~ 11059473 (-) False LOC118937688
XM_036937860.1 mRNA downstream 95842 10840566 ~ 11001122 (-) False LOC110511734
XM_021586929.2 mRNA upstream 67944 11165113 ~ 11168638 (-) True lratd2b
XM_036937950.1 mRNA upstream 150868 11248037 ~ 11261509 (-) False prelid3a
XM_036937954.1 mRNA upstream 150868 11248037 ~ 11261509 (-) False prelid3a
XM_036938010.1 mRNA upstream 300923 11398092 ~ 11402862 (-) True LOC110514530
XM_036938038.1 mRNA upstream 374770 11471939 ~ 12290703 (-) False LOC110513475
TU129220 other downstream 75230 11021041 ~ 11021734 (-) True G113096
TU129027 other downstream 288720 10736729 ~ 10808244 (-) True eif3h
TU129012 other downstream 378306 10648265 ~ 10718658 (-) True G112965
TU128973 other downstream 526156 10570442 ~ 10570808 (-) True G112928
TU128520 other downstream 750029 10346471 ~ 10346935 (-) True G112567
TU130068 other upstream 113304 11210473 ~ 11218154 (-) True G113688
TU130103 other upstream 213674 11310843 ~ 11312658 (-) True G113712
TU130124 other upstream 225872 11323041 ~ 11325612 (-) True G113720
TU130157 other upstream 252173 11349342 ~ 11352741 (-) False G113733
TU130159 other upstream 252173 11349342 ~ 11352741 (-) True G113733

Expression Profile