Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU131241 |
| length | 419 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G114389 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12577859 ~ 12578364 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131211 | lncRNA | downstream | 102090 | 12474320 ~ 12475769 (-) | True | G114364 |
| TU131201 | lncRNA | downstream | 111459 | 12464565 ~ 12466400 (-) | True | G114362 |
| TU131200 | lncRNA | downstream | 113701 | 12462746 ~ 12464158 (-) | True | G114361 |
| TU131198 | lncRNA | downstream | 121822 | 12455762 ~ 12456037 (-) | True | G114359 |
| TU131162 | lncRNA | downstream | 149148 | 12424195 ~ 12428711 (-) | True | G114336 |
| TU131243 | lncRNA | upstream | 9756 | 12588120 ~ 12589443 (-) | False | G114391 |
| TU131244 | lncRNA | upstream | 9756 | 12588120 ~ 12591840 (-) | True | G114391 |
| TU131255 | lncRNA | upstream | 26607 | 12604971 ~ 12608944 (-) | True | G114399 |
| TU131257 | lncRNA | upstream | 40157 | 12618521 ~ 12619052 (-) | True | G114401 |
| TU131256 | lncRNA | upstream | 44925 | 12623289 ~ 12624052 (-) | True | G114400 |
| XR_005035115.1 | mRNA | downstream | 24340 | 12549299 ~ 12553519 (-) | False | LOC118937718 |
| XM_036938124.1 | mRNA | downstream | 24340 | 12549300 ~ 12553519 (-) | True | LOC118937718 |
| XM_036961628.1 | mRNA | downstream | 132702 | 12435469 ~ 12445157 (-) | True | LOC118944056 |
| XM_036938107.1 | mRNA | downstream | 272909 | 12299928 ~ 12304950 (-) | True | osr2 |
| XM_036938110.1 | mRNA | downstream | 272910 | 12299928 ~ 12304949 (-) | False | osr2 |
| XR_005039515.1 | mRNA | upstream | 39142 | 12617506 ~ 12617694 (-) | True | LOC118944197 |
| XM_036938156.1 | mRNA | upstream | 61338 | 12639702 ~ 12673826 (-) | False | pop1 |
| XM_036938159.1 | mRNA | upstream | 61338 | 12639702 ~ 12673874 (-) | False | pop1 |
| XM_036938190.1 | mRNA | upstream | 104694 | 12683058 ~ 12683775 (-) | True | LOC118937724 |
| XM_036938172.1 | mRNA | upstream | 104729 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| TU130213 | other | downstream | 919191 | 11626535 ~ 11658668 (-) | True | LOC110513475 |
| TU130157 | other | downstream | 1225118 | 11349342 ~ 11352741 (-) | False | G113733 |
| TU130159 | other | downstream | 1225118 | 11349342 ~ 11352741 (-) | True | G113733 |
| TU130124 | other | downstream | 1252247 | 11323041 ~ 11325612 (-) | True | G113720 |
| TU130103 | other | downstream | 1265201 | 11310843 ~ 11312658 (-) | True | G113712 |
| TU131242 | other | upstream | 5663 | 12584027 ~ 12585140 (-) | True | G114390 |
| TU131258 | other | upstream | 32305 | 12610669 ~ 12613680 (-) | True | G114402 |
| TU131298 | other | upstream | 129463 | 12707827 ~ 12709315 (-) | True | G114424 |
| TU131319 | other | upstream | 156950 | 12735314 ~ 12739157 (-) | True | G114442 |
| TU131498 | other | upstream | 513728 | 13092092 ~ 13093765 (-) | True | LOC110507534 |
