Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU131260 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G114404 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12625699 ~ 12626684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131256 | lncRNA | downstream | 1647 | 12623289 ~ 12624052 (-) | True | G114400 |
| TU131257 | lncRNA | downstream | 6647 | 12618521 ~ 12619052 (-) | True | G114401 |
| TU131255 | lncRNA | downstream | 16755 | 12604971 ~ 12608944 (-) | True | G114399 |
| TU131244 | lncRNA | downstream | 33859 | 12588120 ~ 12591840 (-) | True | G114391 |
| TU131243 | lncRNA | downstream | 36256 | 12588120 ~ 12589443 (-) | False | G114391 |
| TU131261 | lncRNA | upstream | 8065 | 12634749 ~ 12634983 (-) | True | G114405 |
| TU131262 | lncRNA | upstream | 10079 | 12636763 ~ 12637000 (-) | True | G114406 |
| TU131263 | lncRNA | upstream | 13980 | 12640664 ~ 12641135 (-) | True | pop1 |
| TU131283 | lncRNA | upstream | 23764 | 12650448 ~ 12651971 (-) | True | G114413 |
| TU131286 | lncRNA | upstream | 43115 | 12669799 ~ 12670503 (-) | True | G114414 |
| XR_005039515.1 | mRNA | downstream | 8005 | 12617506 ~ 12617694 (-) | True | LOC118944197 |
| XR_005035115.1 | mRNA | downstream | 72180 | 12549299 ~ 12553519 (-) | False | LOC118937718 |
| XM_036938124.1 | mRNA | downstream | 72180 | 12549300 ~ 12553519 (-) | True | LOC118937718 |
| XM_036961628.1 | mRNA | downstream | 180542 | 12435469 ~ 12445157 (-) | True | LOC118944056 |
| XM_036938107.1 | mRNA | downstream | 320749 | 12299928 ~ 12304950 (-) | True | osr2 |
| XM_036938156.1 | mRNA | upstream | 13018 | 12639702 ~ 12673826 (-) | False | pop1 |
| XM_036938159.1 | mRNA | upstream | 13018 | 12639702 ~ 12673874 (-) | False | pop1 |
| XM_036938190.1 | mRNA | upstream | 56374 | 12683058 ~ 12683775 (-) | True | LOC118937724 |
| XM_036938172.1 | mRNA | upstream | 56409 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| XM_036938186.1 | mRNA | upstream | 56409 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| TU131258 | other | downstream | 12019 | 12610669 ~ 12613680 (-) | True | G114402 |
| TU131242 | other | downstream | 40559 | 12584027 ~ 12585140 (-) | True | G114390 |
| TU130213 | other | downstream | 967031 | 11626535 ~ 11658668 (-) | True | LOC110513475 |
| TU130157 | other | downstream | 1272958 | 11349342 ~ 11352741 (-) | False | G113733 |
| TU131298 | other | upstream | 81143 | 12707827 ~ 12709315 (-) | True | G114424 |
| TU131319 | other | upstream | 108630 | 12735314 ~ 12739157 (-) | True | G114442 |
| TU131498 | other | upstream | 465408 | 13092092 ~ 13093765 (-) | True | LOC110507534 |
| TU131755 | other | upstream | 669149 | 13295833 ~ 13323323 (-) | True | LOC110513400 |
| TU131788 | other | upstream | 704064 | 13330748 ~ 13332309 (-) | False | G114812 |
