Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU131321 |
| length | 402 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G114443 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12739242 ~ 12739759 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131312 | lncRNA | downstream | 13867 | 12723832 ~ 12725375 (-) | True | G114436 |
| TU131311 | lncRNA | downstream | 14520 | 12723462 ~ 12724722 (-) | True | G114435 |
| TU131309 | lncRNA | downstream | 20482 | 12718299 ~ 12718760 (-) | True | G114433 |
| TU131267 | lncRNA | downstream | 55331 | 12682779 ~ 12683911 (-) | False | G114409 |
| TU131268 | lncRNA | downstream | 55331 | 12682779 ~ 12683911 (-) | True | G114409 |
| TU131328 | lncRNA | upstream | 8070 | 12747829 ~ 12749050 (-) | True | G114450 |
| TU131333 | lncRNA | upstream | 12988 | 12752747 ~ 12753840 (-) | True | G114454 |
| TU131339 | lncRNA | upstream | 22458 | 12762217 ~ 12762981 (-) | True | G114459 |
| TU131359 | lncRNA | upstream | 71090 | 12810849 ~ 12811160 (-) | True | G114477 |
| TU131345 | lncRNA | upstream | 73910 | 12813669 ~ 12815861 (-) | False | LOC110525147 |
| XM_036938172.1 | mRNA | downstream | 23632 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| XM_036938186.1 | mRNA | downstream | 23632 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| XR_005035118.1 | mRNA | downstream | 23632 | 12683093 ~ 12715610 (-) | True | LOC118937723 |
| XM_036938190.1 | mRNA | downstream | 55467 | 12683058 ~ 12683775 (-) | True | LOC118937724 |
| XM_036938159.1 | mRNA | downstream | 65368 | 12639702 ~ 12673874 (-) | False | pop1 |
| XM_036938224.1 | mRNA | upstream | 73891 | 12813650 ~ 12890396 (-) | False | LOC110525147 |
| XM_036938228.1 | mRNA | upstream | 73891 | 12813650 ~ 12890396 (-) | False | LOC110525147 |
| XM_036938238.1 | mRNA | upstream | 184713 | 12924472 ~ 12934534 (-) | False | pabpc1a |
| XM_036938245.1 | mRNA | upstream | 184713 | 12924472 ~ 12934534 (-) | True | pabpc1a |
| XR_005039490.1 | mRNA | upstream | 185598 | 12925357 ~ 12925439 (-) | True | LOC118944179 |
| TU131319 | other | downstream | 85 | 12735314 ~ 12739157 (-) | True | G114442 |
| TU131298 | other | downstream | 29927 | 12707827 ~ 12709315 (-) | True | G114424 |
| TU131258 | other | downstream | 125562 | 12610669 ~ 12613680 (-) | True | G114402 |
| TU131242 | other | downstream | 154102 | 12584027 ~ 12585140 (-) | True | G114390 |
| TU130213 | other | downstream | 1080574 | 11626535 ~ 11658668 (-) | True | LOC110513475 |
| TU131498 | other | upstream | 352333 | 13092092 ~ 13093765 (-) | True | LOC110507534 |
| TU131755 | other | upstream | 556074 | 13295833 ~ 13323323 (-) | True | LOC110513400 |
| TU131788 | other | upstream | 590989 | 13330748 ~ 13332309 (-) | False | G114812 |
| TU131789 | other | upstream | 590989 | 13330748 ~ 13332506 (-) | False | G114812 |
| TU131790 | other | upstream | 590989 | 13330748 ~ 13332506 (-) | True | G114812 |
