RNA id: TU131529



Basic Information


Item Value
RNA id TU131529
length 216
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G114598
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13137399 ~ 13137614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggagagcagagagttgtgctctactggtagtgaagtcaggtgcaggagagcagagagttgtgctctactgttagtgaagtcaggtgcaggagagcagagagttgtccTCTACTGGtagagaagtcaggtgcaggagagcagagagttgtccTCTACTGGtagagaagtcaggtgcaggagagcagagagttgtgctctactggtagtgaagtcagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131482 lncRNA upstream 13654 13123509 ~ 13123745 (+) True G114554
TU131481 lncRNA upstream 15208 13121924 ~ 13122191 (+) True G114553
TU131456 lncRNA upstream 46911 13090077 ~ 13090488 (+) True G114537
TU131158 lncRNA upstream 129493 13007683 ~ 13007906 (+) True G114335
TU131153 lncRNA upstream 148770 12988425 ~ 12988629 (+) True G114330
TU131534 lncRNA downstream 28750 13166364 ~ 13166592 (+) True G114603
TU131540 lncRNA downstream 36631 13174245 ~ 13174505 (+) True G114609
TU131542 lncRNA downstream 38230 13175844 ~ 13176085 (+) True G114611
TU131553 lncRNA downstream 48464 13186078 ~ 13186773 (+) True G114617
TU131556 lncRNA downstream 52461 13190075 ~ 13190306 (+) True G114620
XM_036938278.1 mRNA upstream 76093 13046879 ~ 13061306 (+) False LOC110507515
XM_036938340.1 mRNA downstream 55531 13193145 ~ 13241855 (+) False LOC118936508
XM_036938345.1 mRNA downstream 55534 13193148 ~ 13241855 (+) True LOC118936508
XM_036938407.1 mRNA downstream 187323 13324937 ~ 13329430 (+) False LOC110507612
XM_036938410.1 mRNA downstream 187343 13324957 ~ 13329430 (+) False LOC110507612
XM_036938390.1 mRNA downstream 187347 13324961 ~ 13329430 (+) False LOC110507612
TU131145 other upstream 172469 12949360 ~ 12964930 (+) True G114323
TU131068 other upstream 374572 12762232 ~ 12762827 (+) True G114263
TU131041 other upstream 416084 12720730 ~ 12721315 (+) True G114244
TU131040 other upstream 416706 12720408 ~ 12720693 (+) True G114243
TU129672 other upstream 1427622 11708603 ~ 11709777 (+) True G113396
TU131856 other downstream 484363 13621977 ~ 13623965 (+) True LOC110520769
TU131892 other downstream 563996 13701610 ~ 13709374 (+) False LOC110520780
TU132139 other downstream 823647 13961261 ~ 13962812 (+) True LOC110535330
TU132281 other downstream 1004268 14141882 ~ 14144267 (+) True G115190
TU132280 other downstream 1096900 14234514 ~ 14236854 (+) True G115189

Expression Profile