RNA id: TU132191


Basic Information

Item Value
RNA id TU132191
length 321
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G115129
representative False

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13943302 ~ 13946788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctacatgtgagaaatacatctacaaagtccatgtacacacactagcatactgtcctacatgtgagaaatacatctacaaagtccatgtacacacactagcatactgtcctacatgtgagaaatacatctacaaagtccatgtacacacactagcatactgtcctacatgtgagaaatacatcaagtccatgtacacacactagcatactgtcctacatgtgataaatacatctacaaagtccatgtacacacactagcatactgtcctacatgtgagaaatacatctacaaagtccatgtacacacactagcatactgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132123 lncRNA upstream 11464 13905332 ~ 13932445 (+) True G115075
TU132111 lncRNA upstream 16721 13925876 ~ 13927188 (+) False LOC110535355
TU132115 lncRNA upstream 16721 13925876 ~ 13927188 (+) False LOC110535355
TU132116 lncRNA upstream 16721 13925876 ~ 13927188 (+) False LOC110535355
TU132117 lncRNA upstream 16721 13925876 ~ 13927188 (+) False LOC110535355
TU132227 lncRNA downstream 91883 14037240 ~ 14037747 (+) True G115153
TU132229 lncRNA downstream 106299 14051656 ~ 14161240 (+) True G115155
TU132238 lncRNA downstream 115978 14061335 ~ 14171570 (+) True G115162
TU132248 lncRNA downstream 120667 14066024 ~ 14175893 (+) True G115170
TU132141 lncRNA downstream 162944 14108301 ~ 14119096 (+) True G115086
XM_036961641.1 mRNA upstream 18019 13921452 ~ 13925890 (+) False LOC110535355
XM_036962031.1 mRNA upstream 23368 13915738 ~ 13920541 (+) True LOC118944102
XM_036938564.1 mRNA upstream 187879 13663839 ~ 13756030 (+) False LOC110520780
XM_036938538.1 mRNA upstream 300014 13635093 ~ 13643895 (+) False LOC110520770
XM_021620271.2 mRNA downstream 15663 13961020 ~ 13976561 (+) False LOC110535330
XM_036961964.1 mRNA downstream 15663 13961020 ~ 13976561 (+) False LOC110535330
XM_036961817.1 mRNA downstream 82609 14027966 ~ 14042972 (+) False LOC110534090
XM_036961822.1 mRNA downstream 82609 14027966 ~ 14042972 (+) False LOC110534090
XM_036961826.1 mRNA downstream 82609 14027966 ~ 14042972 (+) False LOC110534090
TU131892 other upstream 234535 13701610 ~ 13709374 (+) False LOC110520780
TU131856 other upstream 319944 13621977 ~ 13623965 (+) True LOC110520769
TU131145 other upstream 978979 12949360 ~ 12964930 (+) True G114323
TU131068 other upstream 1181082 12762232 ~ 12762827 (+) True G114263
TU131041 other upstream 1222594 12720730 ~ 12721315 (+) True G114244
TU132139 other downstream 15904 13961261 ~ 13962812 (+) True LOC110535330
TU132281 other downstream 196525 14141882 ~ 14144267 (+) True G115190
TU132280 other downstream 289157 14234514 ~ 14236854 (+) True G115189
TU132383 other downstream 460687 14406044 ~ 14407912 (+) True G115289
TU132480 other downstream 611098 14556455 ~ 14565113 (+) True sec61b

Expression Profile