RNA id: TU132672



Basic Information


Item Value
RNA id TU132672
length 263
lncRNA type read_through
GC content 0.43
exon number 2
gene id G115492
representative False

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14126196 ~ 14224919 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgatgttgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgttgttgaaccaaaggccatgtatgttggatgtgttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132624 lncRNA downstream 7025 14037361 ~ 14119171 (-) True G115460
TU132651 lncRNA downstream 12679 14109507 ~ 14113517 (-) False G115484
TU132615 lncRNA downstream 69365 14055158 ~ 14056831 (-) False LOC110535427
TU132605 lncRNA downstream 92723 14031966 ~ 14033473 (-) True G115450
TU132598 lncRNA downstream 109132 14016834 ~ 14017064 (-) True G115443
TU132747 lncRNA upstream 172987 14300171 ~ 14307142 (-) True G115557
TU132752 lncRNA upstream 196896 14324080 ~ 14324335 (-) True G115561
TU132756 lncRNA upstream 209810 14336994 ~ 14337288 (-) True G115564
TU132759 lncRNA upstream 212964 14340148 ~ 14340542 (-) True G115567
TU132776 lncRNA upstream 213463 14340647 ~ 14345292 (-) True G115575
XM_036961808.1 mRNA downstream 45396 14046340 ~ 14080800 (-) False LOC110535427
XM_036961811.1 mRNA downstream 45396 14046340 ~ 14080800 (-) False LOC110535427
XM_036961932.1 mRNA downstream 98318 13981286 ~ 14027878 (-) True LOC110534084
XM_036961937.1 mRNA downstream 98604 13981286 ~ 14027592 (-) False LOC110534084
XM_036961933.1 mRNA downstream 108398 13981286 ~ 14017798 (-) False LOC110534084
XM_036961802.1 mRNA upstream 28482 14155666 ~ 14183944 (-) False LOC110535417
XM_036961800.1 mRNA upstream 28482 14155666 ~ 14187260 (-) False LOC110535417
XM_036961795.1 mRNA upstream 28482 14155666 ~ 14187261 (-) True LOC110535417
LOC110513641 mRNA upstream 163032 14290216 ~ 14291275 (-) True LOC110513641
XM_021618058.2 mRNA upstream 205567 14332751 ~ 14335014 (-) True LOC110533643
TU132617 other downstream 65238 14057542 ~ 14060958 (-) True LOC110535427
TU132581 other downstream 149635 13962185 ~ 13976561 (-) True G115431
TU131953 other downstream 464605 13653902 ~ 13661591 (-) True LOC118937748
TU131946 other downstream 543590 13574535 ~ 13582606 (-) True G114928
TU131917 other downstream 625913 13494448 ~ 13500283 (-) True LOC110534058
TU132669 other upstream 96675 14223859 ~ 14224919 (-) True G115492
TU132791 other upstream 282582 14409766 ~ 14412176 (-) True LOC110535605
TU132828 other upstream 398884 14526068 ~ 14526520 (-) True tmem245
TU132893 other upstream 428075 14555259 ~ 14556168 (-) True alg2
TU132822 other upstream 436619 14563803 ~ 14565399 (-) False G115601

Expression Profile