Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU133665 |
| length | 554 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G116269 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 15478624 ~ 15479177 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133653 | lncRNA | upstream | 29926 | 15448197 ~ 15448698 (+) | True | rundc3b |
| TU133643 | lncRNA | upstream | 64951 | 15410895 ~ 15413673 (+) | True | G116252 |
| TU133618 | lncRNA | upstream | 79708 | 15397846 ~ 15398916 (+) | True | G116239 |
| TU133603 | lncRNA | upstream | 113877 | 15355858 ~ 15364747 (+) | False | LOC110535783 |
| TU133548 | lncRNA | upstream | 165016 | 15312846 ~ 15313608 (+) | True | G116190 |
| TU133685 | lncRNA | downstream | 24105 | 15503282 ~ 15503845 (+) | True | G116289 |
| TU133720 | lncRNA | downstream | 88049 | 15567226 ~ 15575737 (+) | True | G116323 |
| TU133722 | lncRNA | downstream | 114018 | 15593195 ~ 15603938 (+) | True | G116325 |
| TU133631 | lncRNA | downstream | 131525 | 15610702 ~ 15614267 (+) | False | LOC110535866 |
| TU133633 | lncRNA | downstream | 131525 | 15610702 ~ 15614954 (+) | True | LOC110535866 |
| XM_021621155.2 | mRNA | upstream | 669 | 15467158 ~ 15477955 (+) | True | LOC110535823 |
| XM_021621164.2 | mRNA | upstream | 26768 | 15448845 ~ 15451856 (+) | False | LOC110535842 |
| XM_036938948.1 | mRNA | upstream | 26769 | 15448845 ~ 15451855 (+) | False | LOC110535842 |
| XM_021621177.2 | mRNA | upstream | 30090 | 15437892 ~ 15448534 (+) | False | rundc3b |
| XM_036938847.1 | mRNA | upstream | 78008 | 15374637 ~ 15400616 (+) | True | LOC110534183 |
| XM_036938988.1 | mRNA | downstream | 3214 | 15482391 ~ 15614267 (+) | False | LOC110535866 |
| XM_036938997.1 | mRNA | downstream | 3221 | 15482398 ~ 15614267 (+) | False | LOC110535866 |
| XM_036939074.1 | mRNA | downstream | 144800 | 15623977 ~ 15633803 (+) | False | osgin2 |
| XM_036939081.1 | mRNA | downstream | 144801 | 15623978 ~ 15633803 (+) | True | osgin2 |
| XM_021621339.2 | mRNA | downstream | 192809 | 15671986 ~ 15681594 (+) | False | LOC110535935 |
| TU133662 | other | upstream | 26936 | 15450468 ~ 15451688 (+) | True | LOC110535842 |
| TU133604 | other | upstream | 111835 | 15355858 ~ 15366789 (+) | True | LOC110535783 |
| TU133587 | other | upstream | 140922 | 15337430 ~ 15337702 (+) | True | G116224 |
| TU133558 | other | upstream | 142266 | 15329582 ~ 15336358 (+) | True | LOC110535811 |
| TU133565 | other | upstream | 207015 | 15271202 ~ 15271609 (+) | True | G116207 |
| TU134636 | other | downstream | 704509 | 16183686 ~ 16185784 (+) | True | G117048 |
| TU135335 | other | downstream | 1516533 | 16995710 ~ 16998361 (+) | True | LOC110536275 |
| TU135454 | other | downstream | 1570955 | 17050132 ~ 17050839 (+) | True | G117704 |
| TU135467 | other | downstream | 1594024 | 17073201 ~ 17073701 (+) | True | G117714 |
| TU135631 | other | downstream | 1920836 | 17400013 ~ 17409287 (+) | False | LOC110520798 |
