Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028161 |
| length | 975 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | XLOC_014135 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 31043002 ~ 31054326 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008589 | regulation of smoothened signaling pathway | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-060503-558 | Predicted to be involved in regulation of smoothened signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ANKMY2 (ankyrin repeat and MYND domain containing 2). |
| ensembl_id | ENSDART00000171591 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029725 | lncRNA | upstream | 72977 | 30969012 ~ 30970025 (+) | True | XLOC_014133 |
| TCONS_00029724 | lncRNA | upstream | 199769 | 30841639 ~ 30843233 (+) | True | XLOC_014130 |
| TCONS_00029956 | lncRNA | upstream | 206797 | 30832290 ~ 30836205 (+) | True | XLOC_014129 |
| TCONS_00029955 | lncRNA | upstream | 241014 | 30800052 ~ 30801988 (+) | True | XLOC_014128 |
| TCONS_00029723 | lncRNA | upstream | 317299 | 30724996 ~ 30725703 (+) | True | XLOC_014127 |
| TCONS_00029957 | lncRNA | downstream | 85449 | 31138827 ~ 31153090 (+) | True | XLOC_014137 |
| TCONS_00029958 | lncRNA | downstream | 104269 | 31157647 ~ 31218099 (+) | False | XLOC_014138 |
| TCONS_00029959 | lncRNA | downstream | 197542 | 31250920 ~ 31348348 (+) | False | XLOC_014139 |
| TCONS_00029960 | lncRNA | downstream | 197563 | 31250941 ~ 31279906 (+) | False | XLOC_014139 |
| TCONS_00029961 | lncRNA | downstream | 197563 | 31250941 ~ 31315564 (+) | False | XLOC_014139 |
| TCONS_00028159 | mRNA | upstream | 45208 | 30990129 ~ 30997794 (+) | False | XLOC_014134 |
| TCONS_00028158 | mRNA | upstream | 45208 | 30990129 ~ 30997794 (+) | False | XLOC_014134 |
| TCONS_00028160 | mRNA | upstream | 48842 | 30990815 ~ 30994160 (+) | True | XLOC_014134 |
| TCONS_00028152 | mRNA | upstream | 147729 | 30884983 ~ 30895273 (+) | False | XLOC_014132 |
| TCONS_00028150 | mRNA | upstream | 147730 | 30884706 ~ 30895272 (+) | False | XLOC_014132 |
| TCONS_00028163 | mRNA | downstream | 8340 | 31061718 ~ 31063020 (+) | True | XLOC_014136 |
| TCONS_00028164 | mRNA | downstream | 130117 | 31183495 ~ 31197780 (+) | True | XLOC_014138 |
| TCONS_00028166 | mRNA | downstream | 351308 | 31404686 ~ 31431027 (+) | True | XLOC_014140 |
| TCONS_00028167 | mRNA | downstream | 478665 | 31532043 ~ 31553518 (+) | True | XLOC_014141 |
| TCONS_00028168 | mRNA | downstream | 488229 | 31541607 ~ 31592425 (+) | False | XLOC_014142 |
| TCONS_00028157 | other | upstream | 151992 | 30885312 ~ 30891010 (+) | True | XLOC_014132 |
| TCONS_00028153 | other | upstream | 155751 | 30884984 ~ 30887251 (+) | False | XLOC_014132 |
| TCONS_00028149 | other | upstream | 160546 | 30879788 ~ 30882456 (+) | True | XLOC_014131 |
| TCONS_00028145 | other | upstream | 411942 | 30630943 ~ 30631060 (+) | True | XLOC_014125 |
| TCONS_00028142 | other | upstream | 524429 | 30518455 ~ 30518573 (+) | True | XLOC_014123 |
| TCONS_00028165 | other | downstream | 288645 | 31342023 ~ 31348348 (+) | True | XLOC_014139 |
| TCONS_00028174 | other | downstream | 534553 | 31587931 ~ 31590491 (+) | True | XLOC_014142 |
| TCONS_00028175 | other | downstream | 538146 | 31591524 ~ 31591540 (+) | True | XLOC_014144 |
| TCONS_00028183 | other | downstream | 1005099 | 32058477 ~ 32058599 (+) | True | XLOC_014151 |
| TCONS_00028194 | other | downstream | 1760942 | 32814320 ~ 32818574 (+) | True | XLOC_014160 |
