RNA id: TU136777



Basic Information


Item Value
RNA id TU136777
length 207
lncRNA type intronic
GC content 0.44
exon number 2
gene id G118688
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17803916 ~ 17806454 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgatagtaatgctggtgtaggtTGATAGTCATGCTGATctaggttgatagtaatgctggtgtaggtTGATATTAATGCTGGTctaggttgatagtaatgctgATGTAGTAGCACTATCATTGATGTAAACACTTCCACAGTAGAGTAGGCTGTCTGTTTAGCATGTGTTTGATGGTGGGTCACCATGGAAACACTGTCACTTATCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136772 lncRNA downstream 16282 17785914 ~ 17787634 (-) True G118683
TU136768 lncRNA downstream 25339 17776126 ~ 17778577 (-) True G118679
TU136753 lncRNA downstream 59472 17743969 ~ 17744444 (-) True G118664
TU136706 lncRNA downstream 65153 17733940 ~ 17738763 (-) True LOC110519442
TU136707 lncRNA downstream 66104 17735437 ~ 17737812 (-) True G118637
TU136819 lncRNA upstream 57900 17864354 ~ 17876646 (-) True G118722
TU136821 lncRNA upstream 62101 17868555 ~ 17899971 (-) True G118723
TU136827 lncRNA upstream 65110 17871564 ~ 17872514 (-) True G118726
TU136843 lncRNA upstream 96157 17902611 ~ 17903908 (-) True G118741
TU136848 lncRNA upstream 115620 17922074 ~ 17922290 (-) True G118746
XM_036939926.1 mRNA downstream 4003 17733938 ~ 17799913 (-) False LOC110519442
XM_036939861.1 mRNA downstream 81805 17685997 ~ 17722111 (-) False LOC110536315
XM_036939866.1 mRNA downstream 81805 17685997 ~ 17722111 (-) True LOC110536315
XM_036939855.1 mRNA downstream 81806 17685997 ~ 17722110 (-) False LOC110536315
XM_036939874.1 mRNA downstream 89011 17685997 ~ 17714905 (-) False LOC110536315
XM_036939936.1 mRNA upstream 3522 17809976 ~ 17919784 (-) False LOC118938160
XM_036939944.1 mRNA upstream 3522 17809976 ~ 17919784 (-) False LOC118938160
XM_021622078.2 mRNA upstream 124778 17931232 ~ 17947821 (-) True tars2
XM_021622108.2 mRNA upstream 145927 17952381 ~ 17966177 (-) False LOC110536358
XR_005035418.1 mRNA upstream 145927 17952381 ~ 17966177 (-) False LOC110536358
TU136666 other downstream 93893 17682022 ~ 17710023 (-) True G118606
TU136678 other downstream 137350 17665330 ~ 17666566 (-) True LOC110536309
TU136544 other downstream 319665 17473534 ~ 17484251 (-) True LOC110520799
TU136508 other downstream 471888 17331115 ~ 17332028 (-) True G118494
TU136456 other downstream 551640 17244124 ~ 17252276 (-) True G118456
TU136791 other upstream 103039 17909493 ~ 17919751 (-) True LOC118938160
TU136786 other upstream 193019 17999473 ~ 18003296 (-) False LOC110536375
TU136787 other upstream 193019 17999473 ~ 18003296 (-) True LOC110536375
TU136915 other upstream 326020 18132474 ~ 18152786 (-) True LOC110536462
TU136972 other upstream 355855 18162309 ~ 18165113 (-) True LOC110534274

Expression Profile