Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU138496 |
| length | 260 |
| lncRNA type | intronic |
| GC content | 0.25 |
| exon number | 2 |
| gene id | G120018 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 19819972 ~ 19821386 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138462 | lncRNA | upstream | 61892 | 19758458 ~ 19758725 (+) | True | G119986 |
| TU138354 | lncRNA | upstream | 70393 | 19660907 ~ 19750224 (+) | True | G119899 |
| TU138429 | lncRNA | upstream | 107182 | 19710482 ~ 19713435 (+) | True | G119955 |
| TU138347 | lncRNA | upstream | 135088 | 19683793 ~ 19685529 (+) | True | G119893 |
| TU138377 | lncRNA | upstream | 225450 | 19593803 ~ 19595167 (+) | True | G119916 |
| TU138511 | lncRNA | downstream | 28113 | 19849499 ~ 19850437 (+) | True | G120031 |
| TU138515 | lncRNA | downstream | 28350 | 19849736 ~ 19850902 (+) | True | G120032 |
| TU138531 | lncRNA | downstream | 58580 | 19879966 ~ 19881716 (+) | True | G120048 |
| TU138543 | lncRNA | downstream | 102686 | 19924072 ~ 19924604 (+) | False | G120059 |
| TU138544 | lncRNA | downstream | 102686 | 19924072 ~ 19924604 (+) | False | G120059 |
| XM_021623137.2 | mRNA | upstream | 42286 | 19775429 ~ 19778331 (+) | False | LOC110537243 |
| XM_036961714.1 | mRNA | upstream | 121098 | 19698491 ~ 19699519 (+) | True | LOC118944064 |
| XM_036941028.1 | mRNA | upstream | 137558 | 19676656 ~ 19683059 (+) | False | LOC110537226 |
| XM_036941059.1 | mRNA | downstream | 12003 | 19833389 ~ 19892695 (+) | False | LOC110537257 |
| XM_036941053.1 | mRNA | downstream | 18495 | 19839881 ~ 19892697 (+) | False | LOC110537257 |
| XM_036941057.1 | mRNA | downstream | 18495 | 19839881 ~ 19892698 (+) | True | LOC110537257 |
| NM_001124455.1 | mRNA | downstream | 76933 | 19898319 ~ 19910352 (+) | True | ecac |
| XM_036941114.1 | mRNA | downstream | 124704 | 19946090 ~ 19953207 (+) | True | LOC110537283 |
| TU138435 | other | upstream | 42282 | 19768270 ~ 19778335 (+) | False | LOC110537243 |
| TU138434 | other | upstream | 42282 | 19775460 ~ 19778335 (+) | False | LOC110537243 |
| TU138433 | other | upstream | 42282 | 19775485 ~ 19778335 (+) | True | LOC110537243 |
| TU138416 | other | upstream | 116829 | 19702099 ~ 19703788 (+) | True | G119952 |
| TU138343 | other | upstream | 137558 | 19676735 ~ 19683059 (+) | True | LOC110537226 |
| TU138545 | other | downstream | 102686 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138600 | other | downstream | 197313 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138669 | other | downstream | 324347 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138728 | other | downstream | 349696 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138741 | other | downstream | 358022 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
