Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU139747 |
| length | 867 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 5 |
| gene id | G121030 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20121473 ~ 20126339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139709 | lncRNA | downstream | 45228 | 20069603 ~ 20076245 (-) | True | G121005 |
| TU139687 | lncRNA | downstream | 68301 | 20052654 ~ 20053172 (-) | True | G120997 |
| TU139640 | lncRNA | downstream | 167693 | 19953549 ~ 19953780 (-) | True | G120953 |
| TU139609 | lncRNA | downstream | 228822 | 19891200 ~ 19892651 (-) | True | G120925 |
| TU139597 | lncRNA | downstream | 239558 | 19880288 ~ 19881915 (-) | True | G120916 |
| TU139758 | lncRNA | upstream | 7083 | 20133422 ~ 20133686 (-) | True | G121036 |
| TU139784 | lncRNA | upstream | 19849 | 20146188 ~ 20156383 (-) | True | G121048 |
| TU139797 | lncRNA | upstream | 43862 | 20170201 ~ 20170409 (-) | True | G121061 |
| TU139800 | lncRNA | upstream | 48394 | 20174733 ~ 20175077 (-) | True | G121064 |
| TU139822 | lncRNA | upstream | 83093 | 20209432 ~ 20209636 (-) | True | G121086 |
| XM_021623243.2 | mRNA | downstream | 114630 | 20001127 ~ 20006843 (-) | False | LOC110537306 |
| XM_021623252.2 | mRNA | downstream | 114630 | 20001127 ~ 20006843 (-) | True | LOC110537306 |
| XM_036933452.1 | mRNA | downstream | 124252 | 19987402 ~ 19997221 (-) | False | gstk1 |
| XM_036933463.1 | mRNA | downstream | 124253 | 19987402 ~ 19997220 (-) | False | gstk1 |
| XM_021590531.2 | mRNA | upstream | 186287 | 20312626 ~ 20318150 (-) | False | LOC110509570 |
| NM_001195275.1 | mRNA | upstream | 227775 | 20354114 ~ 20356998 (-) | True | lag-3 |
| NM_001124554.1 | mRNA | upstream | 245766 | 20372105 ~ 20377151 (-) | True | tapbpl |
| XM_036941286.1 | mRNA | upstream | 265638 | 20391977 ~ 20399493 (-) | True | LOC110503568 |
| XM_036941300.1 | mRNA | upstream | 287160 | 20413499 ~ 20420922 (-) | False | LOC118936525 |
| TU139615 | other | downstream | 193013 | 19924098 ~ 19928460 (-) | True | LOC110537275 |
| TU139490 | other | downstream | 425909 | 19693689 ~ 19695564 (-) | True | LOC118944062 |
| TU139386 | other | downstream | 633241 | 19484337 ~ 19488232 (-) | False | cacng6b |
| TU139389 | other | downstream | 633241 | 19485649 ~ 19488232 (-) | False | cacng6b |
| TU138073 | other | downstream | 1072443 | 19048307 ~ 19049030 (-) | True | G119663 |
| TU139782 | other | upstream | 84729 | 20211068 ~ 20212367 (-) | True | G121046 |
| TU139863 | other | upstream | 336343 | 20462682 ~ 20465789 (-) | True | LOC110509624 |
| TU139931 | other | upstream | 372557 | 20498896 ~ 20500587 (-) | True | G121188 |
| TU139978 | other | upstream | 500218 | 20626557 ~ 20627700 (-) | True | G121208 |
| TU140219 | other | upstream | 930259 | 21056598 ~ 21058849 (-) | True | G121421 |
