Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU138726 |
| length | 319 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G120209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20169800 ~ 20170118 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138710 | lncRNA | upstream | 35824 | 20133774 ~ 20133976 (+) | True | G120195 |
| TU138698 | lncRNA | upstream | 43466 | 20120912 ~ 20126334 (+) | False | G120191 |
| TU138706 | lncRNA | upstream | 43466 | 20121392 ~ 20126334 (+) | False | G120191 |
| TU138702 | lncRNA | upstream | 43927 | 20123004 ~ 20125873 (+) | True | G120191 |
| TU138701 | lncRNA | upstream | 44881 | 20120912 ~ 20124919 (+) | False | G120191 |
| TU138727 | lncRNA | downstream | 427 | 20170545 ~ 20170756 (+) | True | G120210 |
| TU138729 | lncRNA | downstream | 1931 | 20172049 ~ 20172445 (+) | True | G120212 |
| TU138730 | lncRNA | downstream | 3622 | 20173740 ~ 20174487 (+) | False | G120213 |
| TU138731 | lncRNA | downstream | 3622 | 20173740 ~ 20174487 (+) | True | G120213 |
| TU138748 | lncRNA | downstream | 15055 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| XM_036941198.1 | mRNA | upstream | 3913 | 20145710 ~ 20165887 (+) | False | zyx |
| XM_036941196.1 | mRNA | upstream | 3913 | 20146136 ~ 20165887 (+) | False | zyx |
| XM_036941148.1 | mRNA | upstream | 76083 | 20050075 ~ 20093717 (+) | True | LOC110534391 |
| XM_036941153.1 | mRNA | upstream | 76085 | 20031891 ~ 20093715 (+) | False | LOC110534391 |
| XM_036941134.1 | mRNA | upstream | 138867 | 20018602 ~ 20030933 (+) | False | casp2 |
| XM_021623314.2 | mRNA | downstream | 9136 | 20179254 ~ 20184791 (+) | False | LOC110537348 |
| XM_021623307.2 | mRNA | downstream | 9136 | 20179254 ~ 20185250 (+) | False | LOC110537348 |
| XM_021623329.2 | mRNA | downstream | 20167 | 20190285 ~ 20196858 (+) | True | nop2 |
| XM_021623354.2 | mRNA | downstream | 26905 | 20197023 ~ 20201032 (+) | True | LOC110537365 |
| LOC110534400 | mRNA | downstream | 32025 | 20202143 ~ 20228607 (+) | False | LOC110534400 |
| TU138669 | other | upstream | 12690 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 144817 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 241323 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138435 | other | upstream | 391465 | 19768270 ~ 19778335 (+) | False | LOC110537243 |
| TU138728 | other | downstream | 964 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138741 | other | downstream | 9290 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138791 | other | downstream | 149621 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 237744 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 730156 | 20900274 ~ 20973920 (+) | False | erfl3 |
