Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU138731 |
| length | 552 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G120213 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20173740 ~ 20174487 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138729 | lncRNA | upstream | 1295 | 20172049 ~ 20172445 (+) | True | G120212 |
| TU138727 | lncRNA | upstream | 2984 | 20170545 ~ 20170756 (+) | True | G120210 |
| TU138726 | lncRNA | upstream | 3622 | 20169800 ~ 20170118 (+) | True | G120209 |
| TU138710 | lncRNA | upstream | 39764 | 20133774 ~ 20133976 (+) | True | G120195 |
| TU138702 | lncRNA | upstream | 47867 | 20123004 ~ 20125873 (+) | True | G120191 |
| TU138748 | lncRNA | downstream | 10686 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| TU138686 | lncRNA | downstream | 36969 | 20211456 ~ 20212371 (+) | True | G120184 |
| TU138668 | lncRNA | downstream | 41731 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
| TU138769 | lncRNA | downstream | 94011 | 20268498 ~ 20270723 (+) | True | G120238 |
| TU138786 | lncRNA | downstream | 137913 | 20312400 ~ 20312765 (+) | True | G120254 |
| XM_036941198.1 | mRNA | upstream | 7853 | 20145710 ~ 20165887 (+) | False | zyx |
| XM_036941196.1 | mRNA | upstream | 7853 | 20146136 ~ 20165887 (+) | False | zyx |
| XM_036941148.1 | mRNA | upstream | 80023 | 20050075 ~ 20093717 (+) | True | LOC110534391 |
| XM_036941153.1 | mRNA | upstream | 80025 | 20031891 ~ 20093715 (+) | False | LOC110534391 |
| XM_036941136.1 | mRNA | upstream | 142807 | 20018764 ~ 20030933 (+) | False | casp2 |
| XM_021623314.2 | mRNA | downstream | 4767 | 20179254 ~ 20184791 (+) | False | LOC110537348 |
| XM_021623307.2 | mRNA | downstream | 4767 | 20179254 ~ 20185250 (+) | False | LOC110537348 |
| XM_021623329.2 | mRNA | downstream | 15798 | 20190285 ~ 20196858 (+) | True | nop2 |
| XM_021623354.2 | mRNA | downstream | 22536 | 20197023 ~ 20201032 (+) | True | LOC110537365 |
| LOC110534400 | mRNA | downstream | 27656 | 20202143 ~ 20228607 (+) | False | LOC110534400 |
| TU138728 | other | upstream | 2359 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138669 | other | upstream | 16630 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 148757 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 245263 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138433 | other | upstream | 395405 | 19775485 ~ 19778335 (+) | True | LOC110537243 |
| TU138741 | other | downstream | 4921 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138791 | other | downstream | 145252 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 233375 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 725787 | 20900274 ~ 20973920 (+) | False | erfl3 |
| TU139026 | other | downstream | 800364 | 20974851 ~ 20976199 (+) | True | erfl3 |
