Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU138686 |
| length | 916 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G120184 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20211456 ~ 20212371 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138748 | lncRNA | upstream | 26042 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| TU138730 | lncRNA | upstream | 36969 | 20173740 ~ 20174487 (+) | False | G120213 |
| TU138731 | lncRNA | upstream | 36969 | 20173740 ~ 20174487 (+) | True | G120213 |
| TU138729 | lncRNA | upstream | 39011 | 20172049 ~ 20172445 (+) | True | G120212 |
| TU138727 | lncRNA | upstream | 40700 | 20170545 ~ 20170756 (+) | True | G120210 |
| TU138668 | lncRNA | downstream | 3847 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
| TU138769 | lncRNA | downstream | 56127 | 20268498 ~ 20270723 (+) | True | G120238 |
| TU138786 | lncRNA | downstream | 100029 | 20312400 ~ 20312765 (+) | True | G120254 |
| TU138690 | lncRNA | downstream | 112731 | 20325102 ~ 20326230 (+) | True | G120188 |
| TU138795 | lncRNA | downstream | 128603 | 20340974 ~ 20341290 (+) | True | G120263 |
| XR_005039497.1 | mRNA | upstream | 2305 | 20208863 ~ 20209151 (+) | True | LOC118944184 |
| XR_005039493.1 | mRNA | upstream | 5424 | 20205740 ~ 20206032 (+) | True | LOC118944180 |
| XR_005039495.1 | mRNA | upstream | 6326 | 20204830 ~ 20205130 (+) | True | LOC118944182 |
| XR_005039496.1 | mRNA | upstream | 8245 | 20202903 ~ 20203211 (+) | True | LOC118944183 |
| XM_021623354.2 | mRNA | upstream | 10424 | 20197023 ~ 20201032 (+) | True | LOC110537365 |
| XM_036990250.1 | mRNA | downstream | 15250 | 20227621 ~ 20232135 (+) | False | cnp-1-2 |
| XM_036990256.1 | mRNA | downstream | 15256 | 20227627 ~ 20232135 (+) | False | cnp-1-2 |
| NM_001124210.1 | mRNA | downstream | 15475 | 20227846 ~ 20232215 (+) | True | cnp-1-2 |
| XM_021623341.2 | mRNA | downstream | 31059 | 20243430 ~ 20249298 (+) | True | LOC100329212 |
| XM_036941236.1 | mRNA | downstream | 37918 | 20250289 ~ 20259650 (+) | False | opn9 |
| TU138741 | other | upstream | 26831 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138728 | other | upstream | 40075 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138669 | other | upstream | 54346 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 186473 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 282979 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138791 | other | downstream | 107368 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 195491 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 687903 | 20900274 ~ 20973920 (+) | False | erfl3 |
| TU139026 | other | downstream | 762480 | 20974851 ~ 20976199 (+) | True | erfl3 |
| TU139028 | other | downstream | 779383 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
