Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU138769 |
| length | 230 |
| lncRNA type | intronic |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G120238 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20268498 ~ 20270723 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU138668 | lncRNA | upstream | 44862 | 20216218 ~ 20223636 (+) | True | LOC110534400 |
| TU138686 | lncRNA | upstream | 56127 | 20211456 ~ 20212371 (+) | True | G120184 |
| TU138748 | lncRNA | upstream | 83084 | 20185173 ~ 20185414 (+) | True | LOC110537348 |
| TU138730 | lncRNA | upstream | 94011 | 20173740 ~ 20174487 (+) | False | G120213 |
| TU138731 | lncRNA | upstream | 94011 | 20173740 ~ 20174487 (+) | True | G120213 |
| TU138786 | lncRNA | downstream | 41677 | 20312400 ~ 20312765 (+) | True | G120254 |
| TU138690 | lncRNA | downstream | 54379 | 20325102 ~ 20326230 (+) | True | G120188 |
| TU138795 | lncRNA | downstream | 70251 | 20340974 ~ 20341290 (+) | True | G120263 |
| TU138800 | lncRNA | downstream | 84015 | 20354738 ~ 20355147 (+) | True | G120268 |
| TU138801 | lncRNA | downstream | 84458 | 20355181 ~ 20355569 (+) | True | G120269 |
| XM_036941236.1 | mRNA | upstream | 8848 | 20250289 ~ 20259650 (+) | False | opn9 |
| XM_021623368.2 | mRNA | upstream | 8848 | 20250595 ~ 20259650 (+) | True | opn9 |
| XM_021623341.2 | mRNA | upstream | 19200 | 20243430 ~ 20249298 (+) | True | LOC100329212 |
| NM_001124210.1 | mRNA | upstream | 36283 | 20227846 ~ 20232215 (+) | True | cnp-1-2 |
| XM_036990250.1 | mRNA | upstream | 36363 | 20227621 ~ 20232135 (+) | False | cnp-1-2 |
| XM_021590486.2 | mRNA | downstream | 27763 | 20298486 ~ 20310775 (+) | False | LOC110509548 |
| XM_036941253.1 | mRNA | downstream | 27763 | 20298486 ~ 20310775 (+) | True | LOC110509548 |
| XM_021590448.2 | mRNA | downstream | 55655 | 20326378 ~ 20337673 (+) | True | LOC110509528 |
| XM_036941266.1 | mRNA | downstream | 67529 | 20338252 ~ 20353846 (+) | True | plekhg6 |
| XM_036941283.1 | mRNA | downstream | 91694 | 20362417 ~ 20364212 (+) | False | LOC110509663 |
| TU138741 | other | upstream | 83873 | 20179408 ~ 20184625 (+) | False | LOC110537348 |
| TU138728 | other | upstream | 97117 | 20171082 ~ 20171381 (+) | True | G120211 |
| TU138669 | other | upstream | 111388 | 20145733 ~ 20157110 (+) | True | zyx |
| TU138600 | other | upstream | 243515 | 20018699 ~ 20024983 (+) | False | casp2 |
| TU138545 | other | upstream | 340021 | 19924072 ~ 19928477 (+) | True | G120059 |
| TU138791 | other | downstream | 49016 | 20319739 ~ 20320256 (+) | True | G120259 |
| TU138671 | other | downstream | 137139 | 20407862 ~ 20419128 (+) | True | G120169 |
| TU139024 | other | downstream | 629551 | 20900274 ~ 20973920 (+) | False | erfl3 |
| TU139026 | other | downstream | 704128 | 20974851 ~ 20976199 (+) | True | erfl3 |
| TU139028 | other | downstream | 721031 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
