Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU139910 |
| length | 243 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G121167 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20428603 ~ 20434075 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139898 | lncRNA | downstream | 64420 | 20362223 ~ 20364183 (-) | True | G121160 |
| TU139891 | lncRNA | downstream | 83873 | 20344495 ~ 20344730 (-) | True | G121153 |
| TU139890 | lncRNA | downstream | 108340 | 20319739 ~ 20320263 (-) | True | G121152 |
| TU139888 | lncRNA | downstream | 110753 | 20316640 ~ 20317850 (-) | True | LOC110509570 |
| TU139773 | lncRNA | downstream | 179304 | 20245018 ~ 20249299 (-) | False | G121044 |
| TU139917 | lncRNA | upstream | 33077 | 20467152 ~ 20468133 (-) | True | G121174 |
| TU139918 | lncRNA | upstream | 34936 | 20469011 ~ 20470007 (-) | True | G121175 |
| TU139919 | lncRNA | upstream | 36033 | 20470108 ~ 20471953 (-) | True | G121176 |
| TU139929 | lncRNA | upstream | 57869 | 20491944 ~ 20528905 (-) | True | G121186 |
| TU139935 | lncRNA | upstream | 75311 | 20509386 ~ 20509940 (-) | False | G121192 |
| XM_036941302.1 | mRNA | downstream | 7679 | 20416089 ~ 20420924 (-) | True | LOC118936525 |
| XM_036941300.1 | mRNA | downstream | 7681 | 20413499 ~ 20420922 (-) | False | LOC118936525 |
| XM_036941286.1 | mRNA | downstream | 29110 | 20391977 ~ 20399493 (-) | True | LOC110503568 |
| NM_001124554.1 | mRNA | downstream | 51452 | 20372105 ~ 20377151 (-) | True | tapbpl |
| NM_001195275.1 | mRNA | downstream | 71605 | 20354114 ~ 20356998 (-) | True | lag-3 |
| XM_021581979.2 | mRNA | upstream | 4720 | 20438795 ~ 20452556 (-) | True | LOC110503575 |
| XM_036941353.1 | mRNA | upstream | 28614 | 20462689 ~ 20465854 (-) | False | LOC110509624 |
| XM_021590328.2 | mRNA | upstream | 31906 | 20465981 ~ 20501722 (-) | False | LOC110509434 |
| XM_021590334.2 | mRNA | upstream | 31906 | 20465981 ~ 20501722 (-) | False | LOC110509434 |
| XM_021590350.2 | mRNA | upstream | 31906 | 20465981 ~ 20501722 (-) | False | LOC110509434 |
| TU139782 | other | downstream | 216236 | 20211068 ~ 20212367 (-) | True | G121046 |
| TU139615 | other | downstream | 500143 | 19924098 ~ 19928460 (-) | True | LOC110537275 |
| TU139490 | other | downstream | 733039 | 19693689 ~ 19695564 (-) | True | LOC118944062 |
| TU139386 | other | downstream | 940371 | 19484337 ~ 19488232 (-) | False | cacng6b |
| TU139863 | other | upstream | 28607 | 20462682 ~ 20465789 (-) | True | LOC110509624 |
| TU139931 | other | upstream | 64821 | 20498896 ~ 20500587 (-) | True | G121188 |
| TU139978 | other | upstream | 192482 | 20626557 ~ 20627700 (-) | True | G121208 |
| TU140219 | other | upstream | 622523 | 21056598 ~ 21058849 (-) | True | G121421 |
| TU140354 | other | upstream | 854541 | 21288616 ~ 21346687 (-) | True | G121533 |
