Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028211 |
| length | 980 |
| lncRNA type | retained_intron |
| GC content | 0.36 |
| exon number | 2 |
| gene id | XLOC_014167 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 33464688 ~ 33515742 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-070705-75 | Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human TRIQK (triple QxxK/R motif containing). |
| ensembl_id | ENSDART00000132840 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029971 | lncRNA | upstream | 683791 | 32765283 ~ 32780918 (+) | True | XLOC_014159 |
| TCONS_00029970 | lncRNA | upstream | 745913 | 32716578 ~ 32718796 (+) | True | XLOC_014158 |
| TCONS_00029969 | lncRNA | upstream | 1096197 | 32257615 ~ 32368512 (+) | False | XLOC_014155 |
| TCONS_00029968 | lncRNA | upstream | 1494943 | 31954959 ~ 31969766 (+) | True | XLOC_014150 |
| TCONS_00029966 | lncRNA | upstream | 1509981 | 31943620 ~ 31954728 (+) | False | XLOC_014149 |
| TCONS_00029972 | lncRNA | downstream | 76138 | 33553613 ~ 33660936 (+) | False | XLOC_014168 |
| TCONS_00029973 | lncRNA | downstream | 76159 | 33553634 ~ 33690360 (+) | False | XLOC_014168 |
| TCONS_00029974 | lncRNA | downstream | 96839 | 33574314 ~ 33690360 (+) | False | XLOC_014168 |
| TCONS_00029975 | lncRNA | downstream | 318273 | 33795748 ~ 33798410 (+) | True | XLOC_014169 |
| TCONS_00029976 | lncRNA | downstream | 803289 | 34280764 ~ 34281978 (+) | True | XLOC_014176 |
| TCONS_00028209 | mRNA | upstream | 324306 | 33139164 ~ 33140403 (+) | True | XLOC_014166 |
| TCONS_00028207 | mRNA | upstream | 326989 | 33093395 ~ 33137720 (+) | False | XLOC_014165 |
| TCONS_00028208 | mRNA | upstream | 328251 | 33093577 ~ 33136458 (+) | True | XLOC_014165 |
| TCONS_00028206 | mRNA | upstream | 392552 | 32979331 ~ 33072157 (+) | True | XLOC_014164 |
| TCONS_00028205 | mRNA | upstream | 393873 | 32979132 ~ 33070836 (+) | False | XLOC_014164 |
| TCONS_00028213 | mRNA | downstream | 76111 | 33553586 ~ 33782829 (+) | False | XLOC_014168 |
| TCONS_00028214 | mRNA | downstream | 223891 | 33701366 ~ 33782829 (+) | False | XLOC_014168 |
| TCONS_00028215 | mRNA | downstream | 224083 | 33701558 ~ 33785914 (+) | False | XLOC_014168 |
| TCONS_00028216 | mRNA | downstream | 224259 | 33701734 ~ 33772593 (+) | False | XLOC_014168 |
| TCONS_00028218 | mRNA | downstream | 254713 | 33732188 ~ 33756078 (+) | False | XLOC_014168 |
| TCONS_00028194 | other | upstream | 646135 | 32814320 ~ 32818574 (+) | True | XLOC_014160 |
| TCONS_00028183 | other | upstream | 1406110 | 32058477 ~ 32058599 (+) | True | XLOC_014151 |
| TCONS_00028175 | other | upstream | 1873169 | 31591524 ~ 31591540 (+) | True | XLOC_014144 |
| TCONS_00028174 | other | upstream | 1874218 | 31587931 ~ 31590491 (+) | True | XLOC_014142 |
| TCONS_00028165 | other | upstream | 2116361 | 31342023 ~ 31348348 (+) | True | XLOC_014139 |
| TCONS_00028217 | other | downstream | 254687 | 33732162 ~ 33765725 (+) | False | XLOC_014168 |
| TCONS_00028221 | other | downstream | 658132 | 34135607 ~ 34135695 (+) | True | XLOC_014171 |
| TCONS_00028225 | other | downstream | 729687 | 34207162 ~ 34207280 (+) | True | XLOC_014173 |
| TCONS_00028229 | other | downstream | 1265231 | 34742706 ~ 34746733 (+) | False | XLOC_014179 |
| TCONS_00028237 | other | downstream | 2301367 | 35778842 ~ 35778957 (+) | True | XLOC_014189 |
