Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029973 |
| length | 1539 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 5 |
| gene id | XLOC_014168 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 33553586 ~ 33785914 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0046777 | protein autophosphorylation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003714 | transcription corepressor activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00028211 | lncRNA | upstream | 76159 | 33464709 ~ 33477475 (+) | False | XLOC_014167 |
| TCONS_00029971 | lncRNA | upstream | 772716 | 32765283 ~ 32780918 (+) | True | XLOC_014159 |
| TCONS_00029970 | lncRNA | upstream | 834838 | 32716578 ~ 32718796 (+) | True | XLOC_014158 |
| TCONS_00029969 | lncRNA | upstream | 1185122 | 32257615 ~ 32368512 (+) | False | XLOC_014155 |
| TCONS_00029968 | lncRNA | upstream | 1583868 | 31954959 ~ 31969766 (+) | True | XLOC_014150 |
| TCONS_00029975 | lncRNA | downstream | 105388 | 33795748 ~ 33798410 (+) | True | XLOC_014169 |
| TCONS_00029976 | lncRNA | downstream | 590404 | 34280764 ~ 34281978 (+) | True | XLOC_014176 |
| TCONS_00029977 | lncRNA | downstream | 1011317 | 34701677 ~ 34738365 (+) | True | XLOC_014178 |
| TCONS_00029978 | lncRNA | downstream | 1058678 | 34749038 ~ 34751777 (+) | True | XLOC_014180 |
| TCONS_00029979 | lncRNA | downstream | 1197215 | 34887575 ~ 34914799 (+) | True | XLOC_014181 |
| TCONS_00028212 | mRNA | upstream | 37892 | 33476557 ~ 33515742 (+) | True | XLOC_014167 |
| TCONS_00028210 | mRNA | upstream | 41938 | 33464688 ~ 33511696 (+) | False | XLOC_014167 |
| TCONS_00028209 | mRNA | upstream | 413231 | 33139164 ~ 33140403 (+) | True | XLOC_014166 |
| TCONS_00028207 | mRNA | upstream | 415914 | 33093395 ~ 33137720 (+) | False | XLOC_014165 |
| TCONS_00028214 | mRNA | downstream | 11006 | 33701366 ~ 33782829 (+) | False | XLOC_014168 |
| TCONS_00028215 | mRNA | downstream | 11198 | 33701558 ~ 33785914 (+) | False | XLOC_014168 |
| TCONS_00028216 | mRNA | downstream | 11374 | 33701734 ~ 33772593 (+) | False | XLOC_014168 |
| TCONS_00028218 | mRNA | downstream | 41828 | 33732188 ~ 33756078 (+) | False | XLOC_014168 |
| TCONS_00028219 | mRNA | downstream | 42127 | 33732487 ~ 33782829 (+) | True | XLOC_014168 |
| TCONS_00028194 | other | upstream | 735060 | 32814320 ~ 32818574 (+) | True | XLOC_014160 |
| TCONS_00028183 | other | upstream | 1495035 | 32058477 ~ 32058599 (+) | True | XLOC_014151 |
| TCONS_00028175 | other | upstream | 1962094 | 31591524 ~ 31591540 (+) | True | XLOC_014144 |
| TCONS_00028174 | other | upstream | 1963143 | 31587931 ~ 31590491 (+) | True | XLOC_014142 |
| TCONS_00028165 | other | upstream | 2205286 | 31342023 ~ 31348348 (+) | True | XLOC_014139 |
| TCONS_00028217 | other | downstream | 41802 | 33732162 ~ 33765725 (+) | False | XLOC_014168 |
| TCONS_00028221 | other | downstream | 445247 | 34135607 ~ 34135695 (+) | True | XLOC_014171 |
| TCONS_00028225 | other | downstream | 516802 | 34207162 ~ 34207280 (+) | True | XLOC_014173 |
| TCONS_00028229 | other | downstream | 1052346 | 34742706 ~ 34746733 (+) | False | XLOC_014179 |
| TCONS_00028237 | other | downstream | 2088482 | 35778842 ~ 35778957 (+) | True | XLOC_014189 |
