Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU141027 |
| length | 226 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G122077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22102015 ~ 22102282 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU140940 | lncRNA | upstream | 77682 | 22019275 ~ 22024333 (+) | True | arhgef1b |
| TU140939 | lncRNA | upstream | 77741 | 22019275 ~ 22024274 (+) | False | arhgef1b |
| TU140961 | lncRNA | upstream | 83200 | 22015130 ~ 22018815 (+) | False | G122030 |
| TU140959 | lncRNA | upstream | 83200 | 22016405 ~ 22018815 (+) | False | G122030 |
| TU140962 | lncRNA | upstream | 83200 | 22016961 ~ 22018815 (+) | True | G122030 |
| TU141003 | lncRNA | downstream | 70430 | 22172712 ~ 22173051 (+) | True | G122065 |
| TU141087 | lncRNA | downstream | 212163 | 22314445 ~ 22316058 (+) | True | G122135 |
| TU141180 | lncRNA | downstream | 271710 | 22373992 ~ 22374650 (+) | True | G122225 |
| TU141198 | lncRNA | downstream | 309579 | 22411861 ~ 22412408 (+) | True | G122242 |
| TU141217 | lncRNA | downstream | 327528 | 22429810 ~ 22431364 (+) | False | G122256 |
| XM_021623884.2 | mRNA | upstream | 32766 | 22030063 ~ 22069249 (+) | False | LOC110537667 |
| XM_021623893.2 | mRNA | upstream | 32766 | 22030109 ~ 22069249 (+) | True | LOC110537667 |
| XM_021624248.2 | mRNA | upstream | 72599 | 22024418 ~ 22029416 (+) | True | LOC110537828 |
| XM_036941866.1 | mRNA | upstream | 77678 | 21967678 ~ 22024337 (+) | False | arhgef1b |
| XM_036941875.1 | mRNA | upstream | 77678 | 21967678 ~ 22024337 (+) | False | arhgef1b |
| XM_021624236.2 | mRNA | downstream | 27814 | 22130096 ~ 22132085 (+) | True | LOC110537821 |
| XM_036942247.1 | mRNA | downstream | 46661 | 22148943 ~ 22150744 (+) | True | LOC110537790 |
| XM_036961779.1 | mRNA | downstream | 52478 | 22154760 ~ 22182084 (+) | True | LOC110537812 |
| LOC110537837 | mRNA | downstream | 68697 | 22170979 ~ 22171985 (+) | True | LOC110537837 |
| XM_021624309.2 | mRNA | downstream | 101670 | 22203952 ~ 22229724 (+) | True | bcl3 |
| TU140958 | other | upstream | 83200 | 22016662 ~ 22018815 (+) | False | G122030 |
| TU140829 | other | upstream | 276921 | 21821214 ~ 21825094 (+) | True | LOC110537735 |
| TU140532 | other | upstream | 515914 | 21585421 ~ 21586101 (+) | True | G121677 |
| TU140444 | other | upstream | 554981 | 21542097 ~ 21547034 (+) | True | LOC118938333 |
| TU139028 | other | upstream | 1086124 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
| TU141079 | other | downstream | 240245 | 22342527 ~ 22346615 (+) | False | LOC110537939 |
| TU141080 | other | downstream | 240245 | 22342527 ~ 22346505 (+) | True | LOC110537939 |
| TU141081 | other | downstream | 246301 | 22348583 ~ 22349936 (+) | True | apoc4 |
| TU141439 | other | downstream | 708485 | 22810767 ~ 22811263 (+) | True | G122459 |
| TU143220 | other | downstream | 1722411 | 23824693 ~ 23825502 (+) | True | G123980 |
