Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU141003 |
| length | 298 |
| lncRNA type | read_through |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G122065 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22172712 ~ 22173051 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141027 | lncRNA | upstream | 70430 | 22102015 ~ 22102282 (+) | True | G122077 |
| TU140940 | lncRNA | upstream | 148379 | 22019275 ~ 22024333 (+) | True | arhgef1b |
| TU140939 | lncRNA | upstream | 148438 | 22019275 ~ 22024274 (+) | False | arhgef1b |
| TU140961 | lncRNA | upstream | 153897 | 22015130 ~ 22018815 (+) | False | G122030 |
| TU141087 | lncRNA | downstream | 141394 | 22314445 ~ 22316058 (+) | True | G122135 |
| TU141180 | lncRNA | downstream | 200941 | 22373992 ~ 22374650 (+) | True | G122225 |
| TU141198 | lncRNA | downstream | 238810 | 22411861 ~ 22412408 (+) | True | G122242 |
| TU141217 | lncRNA | downstream | 256759 | 22429810 ~ 22431364 (+) | False | G122256 |
| TU141216 | lncRNA | downstream | 257396 | 22430447 ~ 22431364 (+) | True | G122256 |
| LOC110537837 | mRNA | upstream | 727 | 22170979 ~ 22171985 (+) | True | LOC110537837 |
| XM_036942247.1 | mRNA | upstream | 21968 | 22148943 ~ 22150744 (+) | True | LOC110537790 |
| XM_021624236.2 | mRNA | upstream | 40627 | 22130096 ~ 22132085 (+) | True | LOC110537821 |
| XM_036942152.1 | mRNA | upstream | 57431 | 22077990 ~ 22115281 (+) | False | LOC110537757 |
| XM_036942162.1 | mRNA | upstream | 57431 | 22077991 ~ 22115281 (+) | True | LOC110537757 |
| XM_021624309.2 | mRNA | downstream | 30901 | 22203952 ~ 22229724 (+) | True | bcl3 |
| XR_005035708.1 | mRNA | downstream | 80601 | 22253652 ~ 22302236 (+) | False | LOC118938435 |
| XR_005035709.1 | mRNA | downstream | 80601 | 22253652 ~ 22302236 (+) | False | LOC118938435 |
| XR_005035710.1 | mRNA | downstream | 115486 | 22288537 ~ 22302236 (+) | True | LOC118938435 |
| XM_021624383.2 | mRNA | downstream | 146051 | 22319102 ~ 22320715 (+) | True | LOC110537912 |
| TU140958 | other | upstream | 153897 | 22016662 ~ 22018815 (+) | False | G122030 |
| TU140829 | other | upstream | 347618 | 21821214 ~ 21825094 (+) | True | LOC110537735 |
| TU140532 | other | upstream | 586611 | 21585421 ~ 21586101 (+) | True | G121677 |
| TU140444 | other | upstream | 625678 | 21542097 ~ 21547034 (+) | True | LOC118938333 |
| TU139028 | other | upstream | 1156821 | 20991754 ~ 21015891 (+) | True | LOC110509768 |
| TU141079 | other | downstream | 169476 | 22342527 ~ 22346615 (+) | False | LOC110537939 |
| TU141080 | other | downstream | 169476 | 22342527 ~ 22346505 (+) | True | LOC110537939 |
| TU141081 | other | downstream | 175532 | 22348583 ~ 22349936 (+) | True | apoc4 |
| TU141439 | other | downstream | 637716 | 22810767 ~ 22811263 (+) | True | G122459 |
| TU143220 | other | downstream | 1651642 | 23824693 ~ 23825502 (+) | True | G123980 |
