Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU141180 |
| length | 299 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G122225 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22373992 ~ 22374650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141087 | lncRNA | upstream | 57934 | 22314445 ~ 22316058 (+) | True | G122135 |
| TU141003 | lncRNA | upstream | 200941 | 22172712 ~ 22173051 (+) | True | G122065 |
| TU141027 | lncRNA | upstream | 271710 | 22102015 ~ 22102282 (+) | True | G122077 |
| TU140940 | lncRNA | upstream | 349659 | 22019275 ~ 22024333 (+) | True | arhgef1b |
| TU140939 | lncRNA | upstream | 349718 | 22019275 ~ 22024274 (+) | False | arhgef1b |
| TU141198 | lncRNA | downstream | 37211 | 22411861 ~ 22412408 (+) | True | G122242 |
| TU141217 | lncRNA | downstream | 55160 | 22429810 ~ 22431364 (+) | False | G122256 |
| TU141216 | lncRNA | downstream | 55797 | 22430447 ~ 22431364 (+) | True | G122256 |
| TU141290 | lncRNA | downstream | 199467 | 22574117 ~ 22578051 (+) | True | G122325 |
| TU141296 | lncRNA | downstream | 205854 | 22580504 ~ 22583666 (+) | True | G122330 |
| XM_021624431.2 | mRNA | upstream | 17925 | 22352969 ~ 22356067 (+) | True | LOC110537948 |
| XM_021624406.2 | mRNA | upstream | 24056 | 22348543 ~ 22349936 (+) | False | apoc4 |
| XM_021624419.2 | mRNA | upstream | 27458 | 22342491 ~ 22346534 (+) | False | LOC110537939 |
| XM_021624394.2 | mRNA | upstream | 37285 | 22332292 ~ 22336707 (+) | True | LOC110537922 |
| XM_021624383.2 | mRNA | upstream | 53277 | 22319102 ~ 22320715 (+) | True | LOC110537912 |
| NM_001124260.1 | mRNA | downstream | 1489 | 22376139 ~ 22378150 (+) | True | apoc2 |
| XM_021624444.2 | mRNA | downstream | 6683 | 22381333 ~ 22384757 (+) | True | LOC110537956 |
| XM_036961789.1 | mRNA | downstream | 16081 | 22390731 ~ 22392179 (+) | True | LOC118944072 |
| XM_021624473.2 | mRNA | downstream | 121471 | 22496121 ~ 22544404 (+) | False | LOC110537974 |
| XM_036942454.1 | mRNA | downstream | 155309 | 22529959 ~ 22544404 (+) | False | LOC110537974 |
| TU141081 | other | upstream | 24056 | 22348583 ~ 22349936 (+) | True | apoc4 |
| TU141079 | other | upstream | 27377 | 22342527 ~ 22346615 (+) | False | LOC110537939 |
| TU141080 | other | upstream | 27487 | 22342527 ~ 22346505 (+) | True | LOC110537939 |
| TU140958 | other | upstream | 355177 | 22016662 ~ 22018815 (+) | False | G122030 |
| TU140829 | other | upstream | 548898 | 21821214 ~ 21825094 (+) | True | LOC110537735 |
| TU141439 | other | downstream | 436117 | 22810767 ~ 22811263 (+) | True | G122459 |
| TU143220 | other | downstream | 1450043 | 23824693 ~ 23825502 (+) | True | G123980 |
| TU143245 | other | downstream | 1487267 | 23861917 ~ 23881636 (+) | False | LOC110538497 |
| TU143247 | other | downstream | 1487267 | 23861917 ~ 23881636 (+) | True | LOC110538497 |
| TU143372 | other | downstream | 1772211 | 24146861 ~ 24148593 (+) | True | G124121 |
