RNA id: TU147867



Basic Information


Item Value
RNA id TU147867
length 320
RNA type TUCP
GC content 0.58
exon number 2
gene id G128185
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27716482 ~ 27717163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aagagagagatggagagatggagacagagagagagatggagacagagggagagatggagacagagagagagatggagacagagagagagatggagacagaaagcgagatgagggagacagagagagagagagatggagacagagagagagatggagacagagagagagagagagatggagacagagggagggatggagacagagagagagatggagacagatggagagatggagacagagagagagagagagagagagagagagagagagagagagagatagagatagagagagagacagggagagatggagacagagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU147860 lncRNA upstream 9121 27707153 ~ 27707361 (+) True G128178
TU147857 lncRNA upstream 15619 27700242 ~ 27700863 (+) True G128175
TU147847 lncRNA upstream 30677 27685588 ~ 27685805 (+) True G128165
TU147845 lncRNA upstream 33826 27682434 ~ 27682656 (+) True G128163
TU147842 lncRNA upstream 50120 27666024 ~ 27666362 (+) True G128160
TU147873 lncRNA downstream 9652 27726815 ~ 27727018 (+) True G128191
TU147874 lncRNA downstream 10164 27727327 ~ 27727615 (+) True G128192
TU147875 lncRNA downstream 11508 27728671 ~ 27728872 (+) True G128193
TU147878 lncRNA downstream 14127 27731290 ~ 27731498 (+) True G128196
TU147885 lncRNA downstream 29111 27746274 ~ 27746547 (+) True G128203
XM_021556734.2 mRNA upstream 38468 27651611 ~ 27678014 (+) False LOC110485628
XM_036944150.1 mRNA upstream 38468 27651987 ~ 27678014 (+) True LOC110485628
XR_005036074.1 mRNA upstream 38746 27651611 ~ 27677736 (+) False LOC110485628
XM_036944084.1 mRNA upstream 297317 27409765 ~ 27419165 (+) False LOC110485563
XM_036944088.1 mRNA upstream 297317 27410989 ~ 27419165 (+) True LOC110485563
LOC110534576 mRNA downstream 190626 27907789 ~ 27909986 (+) True LOC110534576
XM_021556797.2 mRNA downstream 447997 28165160 ~ 28171323 (+) False LOC110485682
XM_021556813.2 mRNA downstream 447997 28165160 ~ 28171323 (+) False LOC110485682
XM_036944270.1 mRNA downstream 447997 28165160 ~ 28171323 (+) False LOC110485682
XM_021556822.2 mRNA downstream 447998 28165161 ~ 28171323 (+) False LOC110485682
TU147350 other upstream 412927 27302078 ~ 27303555 (+) True LOC110485466
TU147273 other upstream 525889 27189991 ~ 27190593 (+) True G127644
TU147247 other upstream 555837 27148176 ~ 27160645 (+) True LOC110485212
TU146788 other upstream 855240 26857698 ~ 26861242 (+) False G127198
TU146777 other upstream 920720 26794210 ~ 26795762 (+) True G127190
TU148132 other downstream 371484 28088647 ~ 28089445 (+) True G128436
TU148197 other downstream 533679 28250842 ~ 28547915 (+) True G128490
TU148570 other downstream 1214893 28932056 ~ 28944390 (+) True LOC110485990
TU148590 other downstream 1222736 28939899 ~ 28981288 (+) True G128853
TU148818 other downstream 1760454 29477617 ~ 29478130 (+) True LOC110534631

Expression Profile