Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU148261 |
| length | 350 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G128546 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 28304484 ~ 28304997 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU148246 | lncRNA | upstream | 39030 | 28264194 ~ 28265454 (+) | True | G128531 |
| TU148195 | lncRNA | upstream | 53723 | 28247437 ~ 28250761 (+) | True | ddr1 |
| TU148171 | lncRNA | upstream | 123483 | 28180682 ~ 28181001 (+) | True | G128474 |
| TU148168 | lncRNA | upstream | 133164 | 28170574 ~ 28171320 (+) | True | LOC110485682 |
| TU148155 | lncRNA | upstream | 163579 | 28140278 ~ 28140905 (+) | True | G128459 |
| TU148264 | lncRNA | downstream | 6829 | 28311826 ~ 28382924 (+) | True | G128549 |
| TU148276 | lncRNA | downstream | 74785 | 28379782 ~ 28380102 (+) | True | G128561 |
| TU148400 | lncRNA | downstream | 263319 | 28568316 ~ 28600609 (+) | True | G128679 |
| TU148373 | lncRNA | downstream | 294290 | 28599287 ~ 28644026 (+) | True | G128652 |
| TU148440 | lncRNA | downstream | 328599 | 28633596 ~ 28634986 (+) | True | G128719 |
| XM_036933644.1 | mRNA | upstream | 7744 | 28281112 ~ 28296740 (+) | True | LOC110485723 |
| XM_021556890.2 | mRNA | upstream | 24204 | 28270251 ~ 28280280 (+) | True | LOC110485735 |
| XM_036944287.1 | mRNA | upstream | 53718 | 28194563 ~ 28250766 (+) | False | ddr1 |
| XM_036944288.1 | mRNA | upstream | 56517 | 28194562 ~ 28247967 (+) | False | ddr1 |
| XM_036944289.1 | mRNA | upstream | 56517 | 28194562 ~ 28247967 (+) | False | ddr1 |
| XM_021556935.2 | mRNA | downstream | 26736 | 28331733 ~ 28334614 (+) | False | ino80e |
| XM_021556951.2 | mRNA | downstream | 26736 | 28331733 ~ 28334614 (+) | True | ino80e |
| XM_021556914.2 | mRNA | downstream | 30513 | 28335510 ~ 28338650 (+) | True | LOC110485753 |
| XM_036944357.1 | mRNA | downstream | 33842 | 28338839 ~ 28356242 (+) | False | vars1 |
| XM_036944361.1 | mRNA | downstream | 33842 | 28338839 ~ 28356242 (+) | True | vars1 |
| TU148132 | other | upstream | 215039 | 28088647 ~ 28089445 (+) | True | G128436 |
| TU147867 | other | upstream | 587321 | 27716482 ~ 27717163 (+) | True | G128185 |
| TU147350 | other | upstream | 1000929 | 27302078 ~ 27303555 (+) | True | LOC110485466 |
| TU147273 | other | upstream | 1113891 | 27189991 ~ 27190593 (+) | True | G127644 |
| TU147247 | other | upstream | 1143839 | 27148176 ~ 27160645 (+) | True | LOC110485212 |
| TU148570 | other | downstream | 627059 | 28932056 ~ 28944390 (+) | True | LOC110485990 |
| TU148590 | other | downstream | 634902 | 28939899 ~ 28981288 (+) | True | G128853 |
| TU148818 | other | downstream | 1172620 | 29477617 ~ 29478130 (+) | True | LOC110534631 |
| TU148912 | other | downstream | 1179636 | 29484633 ~ 29485130 (+) | True | G129155 |
| TU150186 | other | downstream | 1295029 | 29600026 ~ 29641096 (+) | True | G130308 |
