Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU151557 |
| length | 896 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G131556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 30902804 ~ 30908231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU151538 | lncRNA | upstream | 41710 | 30860556 ~ 30861094 (+) | True | G131540 |
| TU151525 | lncRNA | upstream | 87471 | 30814506 ~ 30815333 (+) | True | G131527 |
| TU151493 | lncRNA | upstream | 140890 | 30747628 ~ 30761914 (+) | True | G131502 |
| TU151481 | lncRNA | upstream | 193083 | 30709496 ~ 30709721 (+) | True | G131494 |
| TU151480 | lncRNA | upstream | 193320 | 30708874 ~ 30709484 (+) | True | G131493 |
| TU151751 | lncRNA | downstream | 147829 | 31056060 ~ 31056286 (+) | True | G131719 |
| TU151752 | lncRNA | downstream | 190969 | 31099200 ~ 31099445 (+) | True | G131720 |
| TU151753 | lncRNA | downstream | 192517 | 31100748 ~ 31100965 (+) | True | G131721 |
| TU151765 | lncRNA | downstream | 198610 | 31106841 ~ 31175978 (+) | True | G131731 |
| TU151776 | lncRNA | downstream | 207911 | 31116142 ~ 31124644 (+) | True | G131742 |
| XM_036945585.1 | mRNA | upstream | 11418 | 30873733 ~ 30891386 (+) | False | LOC110534689 |
| XM_036945587.1 | mRNA | upstream | 11418 | 30873733 ~ 30891386 (+) | True | LOC110534689 |
| XM_021619612.2 | mRNA | upstream | 46758 | 30851297 ~ 30856046 (+) | True | LOC110534679 |
| XM_036945552.1 | mRNA | upstream | 58505 | 30824426 ~ 30844299 (+) | False | plekhf2 |
| XM_036945604.1 | mRNA | downstream | 228577 | 31136808 ~ 31146454 (+) | False | LOC110486784 |
| XM_036945598.1 | mRNA | downstream | 228579 | 31136810 ~ 31146454 (+) | True | LOC110486784 |
| XM_036933421.1 | mRNA | downstream | 291104 | 31199335 ~ 31202392 (+) | False | sri |
| XM_021617743.2 | mRNA | downstream | 291215 | 31199446 ~ 31202392 (+) | False | sri |
| NM_001165117.2 | mRNA | downstream | 291295 | 31199526 ~ 31202385 (+) | True | sri |
| TU151514 | other | upstream | 152850 | 30748055 ~ 30749954 (+) | True | G131517 |
| TU151478 | other | upstream | 202181 | 30700182 ~ 30700623 (+) | True | G131491 |
| TU150298 | other | upstream | 1112973 | 29789576 ~ 29789831 (+) | True | G130414 |
| TU150246 | other | upstream | 1208953 | 29685967 ~ 29693851 (+) | True | LOC110486279 |
| TU150186 | other | upstream | 1261708 | 29600026 ~ 29641096 (+) | True | G130308 |
| TU151868 | other | downstream | 383239 | 31291470 ~ 31293034 (+) | False | LOC110534710 |
| TU151908 | other | downstream | 452205 | 31360436 ~ 31363213 (+) | False | eaf1 |
| TU151909 | other | downstream | 452205 | 31360436 ~ 31366322 (+) | True | eaf1 |
| TU152486 | other | downstream | 949417 | 31857648 ~ 31887572 (+) | False | G132342 |
| TU152482 | other | downstream | 949455 | 31857686 ~ 31883073 (+) | True | G132342 |
