RNA id: TU155197



Basic Information


Item Value
RNA id TU155197
length 207
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G134770
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33989240 ~ 33989446 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cttctttctgtaggaaatattatagtttgattacattttaggttATCTGAGAAGTAAATAGAattgtattttgacttgttgaaacaaagtttaggggtagattttcggattcctttctctgcatgaacgagtggattactcaaaacgatggtgccaactaaactgactttttgggatataaagaaggattttatctaacaaaacgac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155166 lncRNA downstream 23500 33965507 ~ 33965740 (-) True G134739
TU155102 lncRNA downstream 108817 33879305 ~ 33880423 (-) True G134680
TU155090 lncRNA downstream 122327 33866308 ~ 33866913 (-) True G134669
TU155056 lncRNA downstream 179445 33809574 ~ 33809795 (-) True G134635
TU155040 lncRNA downstream 200036 33788826 ~ 33789204 (-) True G134619
TU155238 lncRNA upstream 28084 34017530 ~ 34017837 (-) True G134811
TU155286 lncRNA upstream 54304 34043750 ~ 34044206 (-) True G134859
TU155290 lncRNA upstream 56813 34046259 ~ 34046499 (-) True G134863
TU155616 lncRNA upstream 175910 34165356 ~ 34165673 (-) True G135143
TU155619 lncRNA upstream 181736 34171182 ~ 34171460 (-) True LOC110534769
XM_021559825.2 mRNA downstream 138475 33779193 ~ 33850765 (-) True LOC110487899
XM_021559819.2 mRNA downstream 138476 33779193 ~ 33850764 (-) False LOC110487899
XM_021559764.2 mRNA downstream 256796 33726338 ~ 33732444 (-) True LOC110487833
XM_021559751.2 mRNA downstream 256797 33725770 ~ 33732443 (-) False LOC110487833
XM_036946534.1 mRNA upstream 85109 34074555 ~ 34124205 (-) False LOC110487942
XM_036946523.1 mRNA upstream 85109 34074555 ~ 34134234 (-) False LOC110487942
XM_036946539.1 mRNA upstream 85109 34074555 ~ 34134234 (-) False LOC110487942
XM_036946543.1 mRNA upstream 85109 34074555 ~ 34134234 (-) False LOC110487942
XM_036946551.1 mRNA upstream 85109 34074555 ~ 34134234 (-) False LOC110487942
TU155089 other downstream 123303 33865488 ~ 33865937 (-) True G134668
TU154709 other downstream 764138 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 1201119 32748208 ~ 32788121 (-) True G134102
TU154326 other downstream 1237662 32738829 ~ 32751578 (-) False LOC110514821
TU156114 other upstream 614769 34604215 ~ 34604478 (-) True G135575
TU157060 other upstream 1316921 35306367 ~ 35307729 (-) True G136399
TU157405 other upstream 1684852 35674298 ~ 35675627 (-) False drd2l
TU157404 other upstream 1684985 35674431 ~ 35675705 (-) False drd2l
TU158240 other upstream 2380558 36370004 ~ 36370328 (-) True G137479

Expression Profile