RNA id: TU155238



Basic Information


Item Value
RNA id TU155238
length 308
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G134811
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34017530 ~ 34017837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


caaaattcacccaacttattgtgggaagcttgtggaagactacccgaaacgtttgacccaagttaaacaatttaaaggtaatgctaccgaatacaaattgagtgtatgtaaacttctgacccactgggaatttgatgaaagaagtaaaagctgaaataaatcattctctctattattattctgacatttcacatccttaaaataaagtggtggtcctaactgacctaagacagggaatttttactcggattaaatgtcaggagttgtgataaactgagtttaaatgtatttggctaaggtgtatgtaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155197 lncRNA downstream 28084 33989240 ~ 33989446 (-) True G134770
TU155166 lncRNA downstream 51790 33965507 ~ 33965740 (-) True G134739
TU155102 lncRNA downstream 137107 33879305 ~ 33880423 (-) True G134680
TU155090 lncRNA downstream 150617 33866308 ~ 33866913 (-) True G134669
TU155056 lncRNA downstream 207735 33809574 ~ 33809795 (-) True G134635
TU155286 lncRNA upstream 25913 34043750 ~ 34044206 (-) True G134859
TU155290 lncRNA upstream 28422 34046259 ~ 34046499 (-) True G134863
TU155616 lncRNA upstream 147519 34165356 ~ 34165673 (-) True G135143
TU155619 lncRNA upstream 153345 34171182 ~ 34171460 (-) True LOC110534769
TU155646 lncRNA upstream 198980 34216817 ~ 34217054 (-) True G135170
XM_021559825.2 mRNA downstream 166765 33779193 ~ 33850765 (-) True LOC110487899
XM_021559819.2 mRNA downstream 166766 33779193 ~ 33850764 (-) False LOC110487899
XM_021559764.2 mRNA downstream 285086 33726338 ~ 33732444 (-) True LOC110487833
XM_021559751.2 mRNA downstream 285087 33725770 ~ 33732443 (-) False LOC110487833
XM_036946534.1 mRNA upstream 56718 34074555 ~ 34124205 (-) False LOC110487942
XM_036946523.1 mRNA upstream 56718 34074555 ~ 34134234 (-) False LOC110487942
XM_036946539.1 mRNA upstream 56718 34074555 ~ 34134234 (-) False LOC110487942
XM_036946543.1 mRNA upstream 56718 34074555 ~ 34134234 (-) False LOC110487942
XM_036946551.1 mRNA upstream 56718 34074555 ~ 34134234 (-) False LOC110487942
TU155089 other downstream 151593 33865488 ~ 33865937 (-) True G134668
TU154709 other downstream 792428 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 1229409 32748208 ~ 32788121 (-) True G134102
TU154326 other downstream 1265952 32738829 ~ 32751578 (-) False LOC110514821
TU156114 other upstream 586378 34604215 ~ 34604478 (-) True G135575
TU157060 other upstream 1288530 35306367 ~ 35307729 (-) True G136399
TU157405 other upstream 1656461 35674298 ~ 35675627 (-) False drd2l
TU157404 other upstream 1656594 35674431 ~ 35675705 (-) False drd2l
TU158240 other upstream 2352167 36370004 ~ 36370328 (-) True G137479

Expression Profile