RNA id: TU156114



Basic Information


Item Value
RNA id TU156114
length 264
RNA type TUCP
GC content 0.49
exon number 1
gene id G135575
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34604215 ~ 34604478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


actcctcagtaaaaagcataTGACaggctgcttggagtttgccaaagggcaccagaaggactctcaggccatgagaaacaagatgatctGGTCttttgaaaccaagattgaaccctttggcctgaatgccatgcgTCACTTCAGAAGGAAAcatggtaccatccctacggtgaagcatggtggtggcagcatcatgctgtggggatgtttttcagcagtagggactgggagacaagtcaggatcaaggaaaagatgaacggagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU156045 lncRNA downstream 2764 34600883 ~ 34601451 (-) False G135522
TU156047 lncRNA downstream 2764 34600883 ~ 34601451 (-) True G135522
TU155956 lncRNA downstream 130738 34443079 ~ 34473477 (-) True G135438
TU155923 lncRNA downstream 139627 34464322 ~ 34464588 (-) True G135406
TU155959 lncRNA downstream 151124 34450627 ~ 34453091 (-) True G135441
TU156218 lncRNA upstream 131143 34735621 ~ 34736034 (-) True G135668
TU156420 lncRNA upstream 273260 34877738 ~ 34878215 (-) True G135850
TU156530 lncRNA upstream 300366 34904844 ~ 34905084 (-) True G135950
TU156564 lncRNA upstream 347368 34951846 ~ 34952080 (-) True G135980
TU156512 lncRNA upstream 348602 34953080 ~ 34953452 (-) False ankmy2a
XM_036946699.1 mRNA downstream 3824 34493522 ~ 34600391 (-) False LOC110534798
XM_036946705.1 mRNA downstream 3824 34493522 ~ 34600391 (-) True LOC110534798
XM_021560176.2 mRNA downstream 110930 34484065 ~ 34493285 (-) True LOC110488138
XM_021560168.2 mRNA downstream 128844 34465066 ~ 34475371 (-) True LOC110488127
XM_021560161.2 mRNA downstream 129318 34465066 ~ 34474897 (-) False LOC110488127
XM_036946716.1 mRNA upstream 42477 34646955 ~ 34677655 (-) True LOC110534811
XM_021560311.2 mRNA upstream 136017 34740495 ~ 34756679 (-) False etv1
XM_021560294.2 mRNA upstream 136017 34740495 ~ 34756933 (-) False etv1
XM_021560276.2 mRNA upstream 136017 34740495 ~ 34758759 (-) False etv1
XM_021560286.2 mRNA upstream 136017 34740495 ~ 34759144 (-) False etv1
TU155089 other downstream 738278 33865488 ~ 33865937 (-) True G134668
TU154709 other downstream 1379113 33212664 ~ 33225102 (-) True LOC110487618
TU154412 other downstream 1816094 32748208 ~ 32788121 (-) True G134102
TU154326 other downstream 1852637 32738829 ~ 32751578 (-) False LOC110514821
TU154330 other downstream 1852637 32738829 ~ 32751578 (-) False LOC110514821
TU157060 other upstream 701889 35306367 ~ 35307729 (-) True G136399
TU157405 other upstream 1069820 35674298 ~ 35675627 (-) False drd2l
TU157404 other upstream 1069953 35674431 ~ 35675705 (-) False drd2l
TU158240 other upstream 1765526 36370004 ~ 36370328 (-) True G137479
TU158620 other upstream 2029715 36634193 ~ 36639005 (-) True G137839

Expression Profile