Item | Value |
---|---|
RNA id | TU160059 |
length | 338 |
lncRNA type | antisense_over |
GC content | 0.43 |
exon number | 1 |
gene id | G139167 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 38036475 ~ 38036812 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU160029 | lncRNA | upstream | 28890 | 38003066 ~ 38007585 (+) | True | G139139 |
TU159991 | lncRNA | upstream | 90870 | 37945344 ~ 37945605 (+) | True | G139103 |
TU159990 | lncRNA | upstream | 91311 | 37944902 ~ 37945164 (+) | True | G139102 |
TU159910 | lncRNA | upstream | 259526 | 37776591 ~ 37776949 (+) | True | G139040 |
TU159908 | lncRNA | upstream | 262971 | 37772990 ~ 37773504 (+) | True | G139038 |
TU160070 | lncRNA | downstream | 12126 | 38048938 ~ 38049391 (+) | True | G139177 |
TU160073 | lncRNA | downstream | 15537 | 38052349 ~ 38052700 (+) | True | G139180 |
TU160074 | lncRNA | downstream | 16330 | 38053142 ~ 38053430 (+) | True | G139181 |
TU160084 | lncRNA | downstream | 26957 | 38063769 ~ 38064016 (+) | True | G139191 |
TU160381 | lncRNA | downstream | 76176 | 38112988 ~ 38113228 (+) | True | G139452 |
XM_021561628.2 | mRNA | upstream | 125145 | 37891951 ~ 37911330 (+) | False | sh3d21 |
XM_021561620.2 | mRNA | upstream | 125145 | 37891953 ~ 37911330 (+) | True | sh3d21 |
XM_021561587.2 | mRNA | upstream | 145965 | 37863203 ~ 37890510 (+) | False | LOC110489035 |
XM_021561732.2 | mRNA | downstream | 681480 | 38718292 ~ 38734398 (+) | False | LOC110489135 |
XM_036947840.1 | mRNA | downstream | 684459 | 38721271 ~ 38734398 (+) | False | LOC110489135 |
XM_036947848.1 | mRNA | downstream | 684459 | 38721271 ~ 38734398 (+) | True | LOC110489135 |
XM_021561766.2 | mRNA | downstream | 720421 | 38757233 ~ 38786447 (+) | True | LOC110489149 |
XM_036947868.1 | mRNA | downstream | 752724 | 38789536 ~ 38823441 (+) | False | LOC110489163 |
TU159989 | other | upstream | 92463 | 37943742 ~ 37944012 (+) | True | G139101 |
TU159977 | other | upstream | 95761 | 37920391 ~ 37940714 (+) | True | G139089 |
TU159962 | other | upstream | 113892 | 37920348 ~ 37922583 (+) | False | G139089 |
TU160072 | other | downstream | 14547 | 38051359 ~ 38051744 (+) | True | G139179 |
TU164559 | other | downstream | 3502483 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
TU165213 | other | downstream | 3931562 | 41968374 ~ 41969317 (+) | False | G143938 |
TU165214 | other | downstream | 3931562 | 41968374 ~ 41969222 (+) | True | G143938 |
TU166008 | other | downstream | 4473518 | 42510330 ~ 42566030 (+) | True | G144661 |