Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161166 |
| length | 484 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G140192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38639313 ~ 38639796 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161149 | lncRNA | upstream | 9087 | 38629931 ~ 38630226 (+) | True | G140175 |
| TU160778 | lncRNA | upstream | 256104 | 38379248 ~ 38383209 (+) | True | G139826 |
| TU160737 | lncRNA | upstream | 290535 | 38348472 ~ 38348778 (+) | True | G139785 |
| TU160701 | lncRNA | upstream | 312553 | 38326389 ~ 38326760 (+) | True | G139751 |
| TU160700 | lncRNA | upstream | 313001 | 38325962 ~ 38326312 (+) | True | G139750 |
| TU161170 | lncRNA | downstream | 2586 | 38642382 ~ 38642697 (+) | True | G140196 |
| TU161172 | lncRNA | downstream | 4047 | 38643843 ~ 38644077 (+) | True | G140198 |
| TU161179 | lncRNA | downstream | 12162 | 38651958 ~ 38652203 (+) | True | G140205 |
| TU161186 | lncRNA | downstream | 19583 | 38659379 ~ 38659620 (+) | True | G140212 |
| TU161190 | lncRNA | downstream | 20150 | 38659946 ~ 38660212 (+) | True | G140214 |
| XM_021561628.2 | mRNA | upstream | 727983 | 37891951 ~ 37911330 (+) | False | sh3d21 |
| XM_021561620.2 | mRNA | upstream | 727983 | 37891953 ~ 37911330 (+) | True | sh3d21 |
| XM_021561587.2 | mRNA | upstream | 748803 | 37863203 ~ 37890510 (+) | False | LOC110489035 |
| XM_021561732.2 | mRNA | downstream | 78496 | 38718292 ~ 38734398 (+) | False | LOC110489135 |
| XM_036947840.1 | mRNA | downstream | 81475 | 38721271 ~ 38734398 (+) | False | LOC110489135 |
| XM_036947848.1 | mRNA | downstream | 81475 | 38721271 ~ 38734398 (+) | True | LOC110489135 |
| XM_021561766.2 | mRNA | downstream | 117437 | 38757233 ~ 38786447 (+) | True | LOC110489149 |
| XM_036947868.1 | mRNA | downstream | 149740 | 38789536 ~ 38823441 (+) | False | LOC110489163 |
| TU160072 | other | upstream | 587569 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 695301 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 698599 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 717243 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2899499 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 3328578 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 3328578 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3870534 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 5091076 | 43730872 ~ 43731218 (+) | True | G146054 |
