Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161310 |
| length | 435 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G140325 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38974072 ~ 38974620 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161302 | lncRNA | upstream | 255 | 38861507 ~ 38973817 (+) | False | LOC110489269 |
| TU161301 | lncRNA | upstream | 255 | 38971157 ~ 38973817 (+) | True | LOC110489269 |
| TU161349 | lncRNA | upstream | 10189 | 38952835 ~ 38963883 (+) | True | G140363 |
| TU161300 | lncRNA | upstream | 122010 | 38850907 ~ 38852062 (+) | True | G140318 |
| TU161308 | lncRNA | upstream | 126386 | 38847345 ~ 38847686 (+) | True | LOC110489178 |
| TU161396 | lncRNA | downstream | 18383 | 38993003 ~ 38993230 (+) | True | G140409 |
| TU161600 | lncRNA | downstream | 32228 | 39006848 ~ 39007112 (+) | True | G140595 |
| TU161603 | lncRNA | downstream | 40253 | 39014873 ~ 39015078 (+) | True | G140598 |
| TU161606 | lncRNA | downstream | 43591 | 39018211 ~ 39018430 (+) | True | G140601 |
| TU161613 | lncRNA | downstream | 52555 | 39027175 ~ 39027490 (+) | True | G140608 |
| XM_021561946.2 | mRNA | upstream | 115 | 38964554 ~ 38973957 (+) | False | LOC110489269 |
| XR_005039486.1 | mRNA | upstream | 8571 | 38965348 ~ 38965501 (+) | True | LOC118944175 |
| XM_021561873.2 | mRNA | upstream | 21961 | 38942222 ~ 38952111 (+) | False | LOC110489231 |
| XM_021561880.2 | mRNA | upstream | 21966 | 38942241 ~ 38952106 (+) | True | LOC110489231 |
| XM_021561828.2 | mRNA | upstream | 37929 | 38928240 ~ 38936143 (+) | False | LOC110489198 |
| XM_021561959.2 | mRNA | downstream | 12449 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XM_021561973.2 | mRNA | downstream | 26101 | 39000721 ~ 39044657 (+) | False | LOC110489280 |
| XM_036990520.1 | mRNA | downstream | 195653 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | downstream | 195659 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | downstream | 195897 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| TU160072 | other | upstream | 922328 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1030060 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1033358 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1052002 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2564675 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2993754 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2993754 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3535710 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4756252 | 43730872 ~ 43731218 (+) | True | G146054 |
