Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161613 |
| length | 316 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G140608 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39027175 ~ 39027490 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161606 | lncRNA | upstream | 8745 | 39018211 ~ 39018430 (+) | True | G140601 |
| TU161603 | lncRNA | upstream | 12097 | 39014873 ~ 39015078 (+) | True | G140598 |
| TU161600 | lncRNA | upstream | 20063 | 39006848 ~ 39007112 (+) | True | G140595 |
| TU161396 | lncRNA | upstream | 33945 | 38993003 ~ 38993230 (+) | True | G140409 |
| TU161310 | lncRNA | upstream | 52555 | 38974072 ~ 38974620 (+) | True | G140325 |
| TU161624 | lncRNA | downstream | 12080 | 39039570 ~ 39039775 (+) | True | G140619 |
| TU161595 | lncRNA | downstream | 15779 | 39043269 ~ 39044491 (+) | True | LOC110489280 |
| TU161629 | lncRNA | downstream | 25170 | 39052660 ~ 39052928 (+) | True | G140624 |
| TU161631 | lncRNA | downstream | 28748 | 39056238 ~ 39056444 (+) | True | G140626 |
| TU161632 | lncRNA | downstream | 29167 | 39056657 ~ 39056986 (+) | True | G140627 |
| XM_021561959.2 | mRNA | upstream | 36705 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XM_021561946.2 | mRNA | upstream | 53218 | 38964554 ~ 38973957 (+) | False | LOC110489269 |
| XR_005039486.1 | mRNA | upstream | 61674 | 38965348 ~ 38965501 (+) | True | LOC118944175 |
| XM_021561873.2 | mRNA | upstream | 75064 | 38942222 ~ 38952111 (+) | False | LOC110489231 |
| XM_036990520.1 | mRNA | downstream | 142783 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | downstream | 142789 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | downstream | 143027 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| XR_005039454.1 | mRNA | downstream | 206870 | 39234360 ~ 39234415 (+) | True | LOC118944148 |
| XM_021562059.2 | mRNA | downstream | 209037 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| TU160072 | other | upstream | 975431 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1083163 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1086461 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1105105 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2511805 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2940884 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2940884 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3482840 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4703382 | 43730872 ~ 43731218 (+) | True | G146054 |
