Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161632 |
| length | 330 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G140627 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39056657 ~ 39056986 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161631 | lncRNA | upstream | 213 | 39056238 ~ 39056444 (+) | True | G140626 |
| TU161629 | lncRNA | upstream | 3729 | 39052660 ~ 39052928 (+) | True | G140624 |
| TU161595 | lncRNA | upstream | 12166 | 39043269 ~ 39044491 (+) | True | LOC110489280 |
| TU161624 | lncRNA | upstream | 16882 | 39039570 ~ 39039775 (+) | True | G140619 |
| TU161613 | lncRNA | upstream | 29167 | 39027175 ~ 39027490 (+) | True | G140608 |
| TU161633 | lncRNA | downstream | 214 | 39057200 ~ 39057497 (+) | True | G140628 |
| TU161643 | lncRNA | downstream | 15797 | 39072783 ~ 39073005 (+) | True | G140638 |
| TU161645 | lncRNA | downstream | 22420 | 39079406 ~ 39079696 (+) | True | G140640 |
| TU161657 | lncRNA | downstream | 37642 | 39094628 ~ 39094911 (+) | True | G140652 |
| TU161674 | lncRNA | downstream | 49908 | 39106894 ~ 39107101 (+) | True | G140664 |
| XM_021561973.2 | mRNA | upstream | 12000 | 39000721 ~ 39044657 (+) | False | LOC110489280 |
| XM_021561959.2 | mRNA | upstream | 66187 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XM_021561946.2 | mRNA | upstream | 82700 | 38964554 ~ 38973957 (+) | False | LOC110489269 |
| XR_005039486.1 | mRNA | upstream | 91156 | 38965348 ~ 38965501 (+) | True | LOC118944175 |
| XM_021561880.2 | mRNA | upstream | 104551 | 38942241 ~ 38952106 (+) | True | LOC110489231 |
| XM_036990520.1 | mRNA | downstream | 113287 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | downstream | 113293 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | downstream | 113531 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| XR_005039454.1 | mRNA | downstream | 177374 | 39234360 ~ 39234415 (+) | True | LOC118944148 |
| XM_021562059.2 | mRNA | downstream | 179541 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| TU160072 | other | upstream | 1004913 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1112645 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1115943 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1134587 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2482309 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2911388 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2911388 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3453344 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4673886 | 43730872 ~ 43731218 (+) | True | G146054 |
