Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161700 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G140689 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39143831 ~ 39144100 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161697 | lncRNA | upstream | 11035 | 39132481 ~ 39132796 (+) | True | G140686 |
| TU161691 | lncRNA | upstream | 18460 | 39125065 ~ 39125371 (+) | True | G140680 |
| TU161680 | lncRNA | upstream | 30478 | 39113064 ~ 39113353 (+) | True | G140670 |
| TU161674 | lncRNA | upstream | 36730 | 39106894 ~ 39107101 (+) | True | G140664 |
| TU161657 | lncRNA | upstream | 48920 | 39094628 ~ 39094911 (+) | True | G140652 |
| TU161701 | lncRNA | downstream | 1860 | 39145960 ~ 39146188 (+) | True | G140690 |
| TU161704 | lncRNA | downstream | 5191 | 39149291 ~ 39149507 (+) | True | G140693 |
| TU161707 | lncRNA | downstream | 6977 | 39151077 ~ 39151284 (+) | True | G140696 |
| TU161711 | lncRNA | downstream | 18601 | 39162701 ~ 39162901 (+) | True | G140700 |
| TU161712 | lncRNA | downstream | 19017 | 39163117 ~ 39163326 (+) | True | G140701 |
| XM_021561973.2 | mRNA | upstream | 99174 | 39000721 ~ 39044657 (+) | False | LOC110489280 |
| XM_021561959.2 | mRNA | upstream | 153361 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XM_021561946.2 | mRNA | upstream | 169874 | 38964554 ~ 38973957 (+) | False | LOC110489269 |
| XR_005039486.1 | mRNA | upstream | 178330 | 38965348 ~ 38965501 (+) | True | LOC118944175 |
| XM_021561880.2 | mRNA | upstream | 191725 | 38942241 ~ 38952106 (+) | True | LOC110489231 |
| XM_036990520.1 | mRNA | downstream | 26173 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | downstream | 26179 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | downstream | 26417 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| XR_005039454.1 | mRNA | downstream | 90260 | 39234360 ~ 39234415 (+) | True | LOC118944148 |
| XM_021562059.2 | mRNA | downstream | 92427 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| TU160072 | other | upstream | 1092087 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1199819 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1203117 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1221761 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2395195 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2824274 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2824274 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3366230 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4586772 | 43730872 ~ 43731218 (+) | True | G146054 |
