Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161667 |
| length | 270 |
| lncRNA type | antisense_over |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G140658 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39230619 ~ 39231565 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161723 | lncRNA | upstream | 50365 | 39177779 ~ 39180761 (+) | True | G140712 |
| TU161718 | lncRNA | upstream | 62387 | 39168466 ~ 39168739 (+) | True | G140707 |
| TU161716 | lncRNA | upstream | 64475 | 39166274 ~ 39166651 (+) | True | G140705 |
| TU161714 | lncRNA | upstream | 65933 | 39164862 ~ 39165193 (+) | True | G140703 |
| TU161712 | lncRNA | upstream | 67800 | 39163117 ~ 39163326 (+) | True | G140701 |
| TU161770 | lncRNA | downstream | 77104 | 39308669 ~ 39325188 (+) | True | G140753 |
| TU161774 | lncRNA | downstream | 94643 | 39326208 ~ 39326426 (+) | True | G140757 |
| TU161775 | lncRNA | downstream | 97760 | 39329325 ~ 39329577 (+) | True | G140758 |
| TU161784 | lncRNA | downstream | 110217 | 39341782 ~ 39347457 (+) | True | G140766 |
| TU161790 | lncRNA | downstream | 117960 | 39349525 ~ 39349785 (+) | True | G140771 |
| XM_036990520.1 | mRNA | upstream | 35842 | 39170273 ~ 39195284 (+) | False | atp1a3 |
| XM_036933222.1 | mRNA | upstream | 35842 | 39170279 ~ 39195284 (+) | False | atp1a3 |
| NM_001124630.1 | mRNA | upstream | 35885 | 39170517 ~ 39195241 (+) | True | atp1a3 |
| XM_021561973.2 | mRNA | upstream | 186469 | 39000721 ~ 39044657 (+) | False | LOC110489280 |
| XM_021561959.2 | mRNA | upstream | 240656 | 38987069 ~ 38990470 (+) | True | LOC110489273 |
| XR_005039454.1 | mRNA | downstream | 2795 | 39234360 ~ 39234415 (+) | True | LOC118944148 |
| XM_021562059.2 | mRNA | downstream | 4962 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| XM_021562060.2 | mRNA | downstream | 4962 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| XM_036947879.1 | mRNA | downstream | 4962 | 39236527 ~ 39255787 (+) | False | LOC110489329 |
| XM_021562066.2 | mRNA | downstream | 15779 | 39247344 ~ 39255790 (+) | True | LOC110489329 |
| TU160072 | other | upstream | 1179382 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1287114 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1290412 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1309056 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 2307730 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2736809 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2736809 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 3278765 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 4499307 | 43730872 ~ 43731218 (+) | True | G146054 |
